A Genome-Wide Functional Screen Identifies Enhancer and Protective Genes for Amyloid Beta-Peptide Toxicity.
Pol Picón-PagèsMònica Bosch-MoratóLaia SubiranaFrancisca Rubio-MoscardóBiuse GuivernauHugo Fanlo-UcarMelisa Ece ZeylanSimge SenyuzVíctor Herrera-FernándezRubén VicenteJosé M Fernández-FernándezJordi García-OjalvoAttila GursoyOzlem KeskinBaldomero Oliva MiguelFrancesc PosasEulalia de NadalFrancisco J MuñozPublished in: International journal of molecular sciences (2023)
Alzheimer's disease (AD) is known to be caused by amyloid β-peptide (Aβ) misfolded into β-sheets, but this knowledge has not yet led to treatments to prevent AD. To identify novel molecular players in Aβ toxicity, we carried out a genome-wide screen in Saccharomyces cerevisiae , using a library of 5154 gene knock-out strains expressing Aβ 1-42 . We identified 81 mammalian orthologue genes that enhance Aβ 1-42 toxicity, while 157 were protective. Next, we performed interactome and text-mining studies to increase the number of genes and to identify the main cellular functions affected by Aβ oligomers (oAβ). We found that the most affected cellular functions were calcium regulation, protein translation and mitochondrial activity. We focused on SURF4, a protein that regulates the store-operated calcium channel (SOCE). An in vitro analysis using human neuroblastoma cells showed that SURF4 silencing induced higher intracellular calcium levels, while its overexpression decreased calcium entry. Furthermore, SURF4 silencing produced a significant reduction in cell death when cells were challenged with oAβ 1-42 , whereas SURF4 overexpression induced Aβ 1-42 cytotoxicity. In summary, we identified new enhancer and protective activities for Aβ toxicity and showed that SURF4 contributes to oAβ 1-42 neurotoxicity by decreasing SOCE activity.
Keyphrases
- genome wide
- oxidative stress
- dna methylation
- induced apoptosis
- cell cycle arrest
- cell death
- diabetic rats
- copy number
- saccharomyces cerevisiae
- transcription factor
- high glucose
- binding protein
- endothelial cells
- knee osteoarthritis
- high throughput
- genome wide identification
- healthcare
- cell proliferation
- escherichia coli
- endoplasmic reticulum stress
- amino acid
- smoking cessation
- cognitive decline
- signaling pathway
- gene expression
- drug induced
- oxide nanoparticles
- small molecule
- pi k akt
- reactive oxygen species
- genome wide analysis