DODGE: automated point source bacterial outbreak detection using cumulative long term genomic surveillance.
Michael PayneDalong HuQinning WangGeraldine SullivanRikki M GrahamIrani U RathnayakeAmy V JennisonVitali SintchenkoRuiting LanPublished in: Bioinformatics (Oxford, England) (2024)
DODGE is freely available at https://github.com/LanLab/dodge and can easily be installed using Conda.