Single-cell immune profiling reveals functional diversity of T cells in tuberculous pleural effusion.
Yi CaiYejun WangChenyan ShiYouchao DaiFuxiang LiYuzhong XuPeize ZhangFanhui KongGuofang DengZhihua WenQi ZhouBoxi Chris KangAmit SinghalQianting YangCarl G FengXinchun ChenPublished in: The Journal of experimental medicine (2022)
Orchestration of an effective T lymphocyte response at infection sites is critical for protection against Mycobacterium tuberculosis (Mtb) infection. However, the local T cell immunity landscape in human tuberculosis is poorly defined. Tuberculous pleural effusion (TPE), caused by Mtb, is characterized by an influx of leukocytes to the pleural space, providing a platform suitable for delineating complex tissue responses to Mtb infection. Using single-cell transcriptomics and T cell receptor sequencing, we analyzed mononuclear cell populations in paired pleural fluid and peripheral blood of TPE patients. While all major cell clusters were present in both tissues, their relative proportions varied significantly by anatomic location. Lineage tracking analysis revealed subsets of CD8 and CD4 T cell populations with distinct effector functions specifically expanded at pleural sites. Granzyme K-expressing CD8 T cells were preferentially enriched and clonally expanded in pleural fluid from TPE, suggesting that they are involved in the pathogenesis of the disease. The findings collectively reveal the landscape of local T cell immunity in tuberculosis.
Keyphrases
- single cell
- mycobacterium tuberculosis
- peripheral blood
- pulmonary tuberculosis
- rna seq
- high throughput
- end stage renal disease
- endothelial cells
- newly diagnosed
- ejection fraction
- chronic kidney disease
- gene expression
- prognostic factors
- dna methylation
- regulatory t cells
- emergency department
- dendritic cells
- hiv aids
- genetic diversity
- genome wide
- bone marrow
- human immunodeficiency virus
- patient reported outcomes