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Single-molecule analysis reveals two distinct states of the compressed RecA filament on single-stranded DNA.

Aleksandr AlekseevMaksim SerdakovGeorgii PobegalovAlexander YakimovIrina BakhlanovaDmitry BaitinMikhail Khodorkovskii
Published in: FEBS letters (2020)
The RecA protein plays a key role in bacterial homologous recombination (HR) and acts through assembly of long helical filaments around single-stranded DNA in the presence of ATP. Large-scale conformational changes induced by ATP hydrolysis result in transitions between stretched and compressed forms of the filament. Here, using a single-molecule approach, we show that compressed RecA nucleoprotein filaments can exist in two distinct interconvertible states depending on the presence of ADP in the monomer-monomer interface. Binding of ADP promotes cooperative conformational transitions and directly affects mechanical properties of the filament. Our findings reveal that RecA nucleoprotein filaments are able to continuously cycle between three mechanically distinct states that might have important implications for RecA-mediated processes of HR.
Keyphrases
  • single molecule
  • binding protein
  • atomic force microscopy
  • living cells
  • dna damage
  • dna repair
  • molecularly imprinted
  • genome wide
  • dna methylation
  • nucleic acid
  • oxidative stress
  • high resolution
  • anaerobic digestion