Circulating MicroRNA Profiling Identifies Distinct MicroRNA Signatures in Acute Ischemic Stroke and Transient Ischemic Attack Patients.
Salman M ToorEman K AldousAijaz ParrayNaveed AkhtarYasser Al-SarrajEssam M AbdelalimAbdelilah ArredouaniOmar M A El-AgnafPaul J ThornalleySajitha V PananchikkalGhulam Jeelani PirRaheem AyadathilAshfaq ShuaibNehad M AlajezOmar M E AlbaghaPublished in: International journal of molecular sciences (2022)
Transient ischemic attack (TIA) refers to a momentary neurologic deficit caused by focal cerebral, spinal or retinal ischemic insult. TIA is associated with a high risk of impending acute ischemic stroke (AIS), a neurologic dysfunction characterized by focal cerebral, spinal or retinal infarction. Understanding the differences in molecular pathways in AIS and TIA has merit for deciphering the underlying cause for neuronal deficits with long-term effects and high risks of morbidity and mortality. In this study, we performed comprehensive investigations into the circulating microRNA (miRNA) profiles of AIS ( n = 191) and TIA ( n = 61) patients. We performed RNA-Seq on serum samples collected within 24 hrs of clinical diagnosis and randomly divided the study populations into discovery and validation cohorts. We identified a panel of 11 differentially regulated miRNAs at FDR < 0.05. Hsa-miR-548c-5p, -20a-5p, -18a-5p, -484, -652-3p, -486-3p, -24-3p, -181a-5p and -222-3p were upregulated, while hsa-miR-500a-3p and -206 were downregulated in AIS patients compared to TIA patients. We also probed the previously validated gene targets of our identified miRNA panel to highlight the molecular pathways affected in AIS. Moreover, we developed a multivariate classifier with potential utilization as a discriminative biomarker for AIS and TIA patients. The underlying molecular pathways in AIS compared to TIA may be explored further in functional studies for therapeutic targeting in clinical translation.
Keyphrases
- end stage renal disease
- chronic kidney disease
- ejection fraction
- peritoneal dialysis
- prognostic factors
- rna seq
- small molecule
- traumatic brain injury
- gene expression
- cell proliferation
- drug delivery
- diabetic retinopathy
- long non coding rna
- risk assessment
- cerebral ischemia
- spinal cord injury
- genome wide
- high throughput
- cancer therapy
- dna methylation
- single cell
- molecular dynamics simulations
- patient reported
- human serum albumin