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The amyloid structure of mouse RIPK3 (receptor interacting protein kinase 3) in cell necroptosis.

Xia-Lian WuHong HuXing-Qi DongJing ZhangJian WangCharles D SchwietersJing LiuGuo-Xiang WuBing LiJing-Yu LinHua-Yi WangJun-Xia Lu
Published in: Nature communications (2021)
RIPK3 amyloid complex plays crucial roles during TNF-induced necroptosis and in response to immune defense in both human and mouse. Here, we have structurally characterized mouse RIPK3 homogeneous self-assembly using solid-state NMR, revealing a well-ordered N-shaped amyloid core structure featured with 3 parallel in-register β-sheets. This structure differs from previously published human RIPK1/RIPK3 hetero-amyloid complex structure, which adopted a serpentine fold. Functional studies indicate both RIPK1-RIPK3 binding and RIPK3 amyloid formation are essential but not sufficient for TNF-induced necroptosis. The structural integrity of RIPK3 fibril with three β-strands is necessary for signaling. Molecular dynamics simulations with a mouse RIPK1/RIPK3 model indicate that the hetero-amyloid is less stable when adopting the RIPK3 fibril conformation, suggesting a structural transformation of RIPK3 from RIPK1-RIPK3 binding to RIPK3 amyloid formation. This structural transformation would provide the missing link connecting RIPK1-RIPK3 binding to RIPK3 homo-oligomer formation in the signal transduction.
Keyphrases
  • molecular dynamics simulations
  • rheumatoid arthritis
  • endothelial cells
  • magnetic resonance
  • protein kinase
  • single cell
  • mesenchymal stem cells
  • high resolution
  • transcription factor
  • bone marrow
  • molecular docking