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Source of Rate Acceleration for Carbocation Cyclization in Biomimetic Supramolecular Cages.

Quynh Nhu N NguyenKay T XiaYue ZhangNanhao ChenMariko MorimotoXiaokun PeiYang HaJinghua GuoWanli YangLee-Ping WangRobert G BergmanKenneth N RaymondF Dean TosteDean Joseph Tantillo
Published in: Journal of the American Chemical Society (2022)
The results of quantum chemical and molecular dynamics calculations reveal that polyanionic gallium-based cages accelerate cyclization reactions of pentadienyl alcohols as a result of substrate cage interactions, preferential binding of reactive conformations of substrate/H 3 O + pairs, and increased substrate basicity. However, the increase in basicity dominates. Experimental structure-activity relationship studies in which the metal vertices and overall charge of the cage are varied confirm the model derived via calculations.
Keyphrases
  • molecular dynamics
  • density functional theory
  • structure activity relationship
  • structural basis
  • amino acid
  • genome wide
  • single cell
  • case control