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A high-quality chromosome-level genome assembly of Ficus hirta.

Weicheng HuangYamei DingSongle FanWanzhen LiuHongfeng ChenSimon SegarStephen G ComptonHui Yu
Published in: Scientific data (2024)
Ficus species (Moraceae) play pivotal roles in tropical and subtropical ecosystems. Thriving across diverse habitats, from rainforests to deserts, they harbor a multitude of mutualistic and antagonistic interactions with insects, nematodes, and pathogens. Despite their ecological significance, knowledge about the genomic background of Ficus remains limited. In this study, we report a chromosome-level reference genome of F. hirta, with a total size of 297.27 Mb, containing 28,625 protein-coding genes and 44.67% repeat sequences. These findings illuminate the genetic basis of Ficus responses to environmental challenges, offering valuable genomic resources for understanding genome size, adaptive evolution, and co-evolution with natural enemies and mutualists within the genus.
Keyphrases
  • copy number
  • genome wide
  • climate change
  • dna methylation
  • human health
  • healthcare
  • risk assessment
  • gene expression
  • small molecule
  • amino acid
  • genetic diversity
  • multidrug resistant