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Comparative genomics of Bacteria commonly identified in the built environment.

Nancy MerinoShu ZhangMasaru TomitaHaruo Suzuki
Published in: BMC genomics (2019)
Of the four genomic features tested, the S value could play a more important role in understanding the lifestyles of bacteria living in the BE. This parameter could be indicative of bacterial growth rates, gene expression, and other factors, potentially affected by BE growth conditions (e.g., temperature, humidity, and nutrients). However, further experimental evidence, species-level BE studies, and classification by BE location is needed to define the relationship between genomic features and the lifestyles of BE bacteria more robustly.
Keyphrases
  • gene expression
  • copy number
  • machine learning
  • dna methylation
  • deep learning
  • single cell
  • heavy metals
  • genome wide