Targeted long-read sequencing allows for rapid identification of pathogenic disease-causing variants in retinoblastoma.
Kenji NakamichiAndrew StaceyDebarshi MustafiPublished in: Ophthalmic genetics (2022)
Targeted long-read technology allows for focused sequencing effort for variant discovery. Application of this for the first time in a retinoblastoma patient allowed haplotagged variant identification and demonstrated excellent concordance with benchmark short-read sequencing. The added benefit of targeted long-read sequencing to resolve disease-causing genomic variation in RB1 rapidly from a blood draw will provide a more definitive diagnosis of heritable RB and guide management decisions for patients and their families.
Keyphrases
- single cell
- single molecule
- cancer therapy
- end stage renal disease
- newly diagnosed
- ejection fraction
- copy number
- chronic kidney disease
- high throughput
- small molecule
- peritoneal dialysis
- case report
- squamous cell carcinoma
- gene expression
- bioinformatics analysis
- dna methylation
- radiation therapy
- patient reported outcomes
- quantum dots
- loop mediated isothermal amplification
- sensitive detection