New oxomethacrylate and acetamide: synthesis, characterization, and their computational approaches: molecular docking, molecular dynamics, and ADME analyses.
Verda ÇobanNevin ÇankayaSerap Yalçın AzarkanPublished in: Drug and chemical toxicology (2024)
The compounds 2-chloro-N-(3-methoxyphenyl)acetamide (m-acetamide) and 2-(3-methoxyphenylamino)-2-oxoethyl methacrylate (3MPAEMA) were synthesized in this study for the first time in the literature. FTIR, 1 H, and 13 C NMR spectroscopic techniques were used to characterize it. Subsequently, computational techniques were used to assess various ADME factors, such as drug-likeness properties, bioavailability score, and adherence to Lipinski's rule. Finally, molecular docking experiments were conducted with the human topoisomerase α2 (TOP2A) protein to verify and validate the reliability and stability of the docking procedure. The results of the docking scores, which quantify binding affinity, indicated that these derivatives exhibited a stronger affinity for TOP2A.
Keyphrases
- molecular docking
- molecular dynamics
- molecular dynamics simulations
- density functional theory
- endothelial cells
- protein protein
- systematic review
- magnetic resonance
- high resolution
- binding protein
- minimally invasive
- small molecule
- emergency department
- capillary electrophoresis
- type diabetes
- skeletal muscle
- metabolic syndrome
- drug induced
- dna binding
- structure activity relationship