Large-scale deployment of a rice 6 K SNP array for genetics and breeding applications.

Michael J ThomsonNamrata SinghMaria S DwiyantiDiane R WangMark H WrightFrancisco Agosto PerezGenevieve DeClerckJoong Hyoun ChinGeraldine A Malitic-LayaoenVenice Margarette JuanillasChristine J Dilla-ErmitaRamil MauleonTobias KretzschmarSusan R McCouch

Published in: Rice (New York, N.Y.) (2017)

The C6AIR has been successfully used to generate rapid and high-quality genotype data for diverse genetics and breeding applications in rice, and provides the basis for an optimized design in the C7AIR.

Keyphrases

high density
genome wide
electronic health record
high resolution
big data
gene expression
mass spectrometry
loop mediated isothermal amplification
data analysis
deep learning
genetic diversity