Persistent memory as an effective alternative to random access memory in metagenome assembly.
Jingchao SunZhining QiuRob EganHarrison HoYue LiZhong WangPublished in: BMC bioinformatics (2022)
We demonstrated that PMem is capable of expanding the capacity of DRAM to allow larger metagenome assembly with a potential tradeoff in speed. Because PMem can be used directly without any application-specific code modification, these findings are likely to be generalized to other memory-intensive bioinformatics applications.
Keyphrases