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Identification of the RSX interactome in a marsupial shows functional coherence with the Xist interactome during X inactivation.

Kim L McIntyreShafagh A WatersLing ZhongGene Hart-SmithMark RafteryZahra A ChewHardip R PatelJennifer A Marshall GravesPaul D Waters
Published in: Genome biology (2024)
The marsupial specific RSX lncRNA is the functional analogue of the eutherian specific XIST, which coordinates X chromosome inactivation. We characterized the RSX interactome in a marsupial representative (the opossum Monodelphis domestica), identifying 135 proteins, of which 54 had orthologues in the XIST interactome. Both interactomes were enriched for biological pathways related to RNA processing, regulation of translation, and epigenetic transcriptional silencing. This represents a remarkable example showcasing the functional coherence of independently evolved lncRNAs in distantly related mammalian lineages.
Keyphrases
  • gene expression
  • dna methylation
  • transcription factor
  • oxidative stress
  • heat shock
  • genome wide
  • heat stress