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The complete chloroplast genome sequence of the mangrove associate species Talipariti tiliaceum.

Zhimin QiuYunxiao ZhuZhaokui DuPingyong Bao
Published in: Mitochondrial DNA. Part B, Resources (2021)
Talipariti tiliaceum is an evergreen mangrove associate species distributed throughout the world. In this study, the complete chloroplast genome sequence of T. tiliaceum was assembled and characterized using high-throughput sequencing data. The chloroplast genome was found to be 161 766 bp in length, consisting of large single-copy (LSC) and small single-copy (SSC) regions of 89 273 and 19 551 bp, respectively, which were separated by a pair of 26 471 bp inverted repeat (IR) regions. The genome contained 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. A phylogenetic tree including 66 chloroplast genomes from various species revealed that T. tiliaceum was most related to T. hamabo of the same genus.
Keyphrases
  • genome wide
  • bioinformatics analysis
  • arabidopsis thaliana
  • genome wide identification
  • gene expression
  • genetic diversity
  • electronic health record