Abhyudai Singh

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 56

Top Topics

Escherichia Coli

Top Venues

Nature communications

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Guillaume Harmange, Raúl A Reyes Hueros, Dylan L Schaff, Benjamin Emert, Michael Saint-Antoine, Laura C Kim, Zijian Niu, Shivani Nellore, Mitchell E Fane, Gretchen M Alicea, Ashani T Weeraratna, M Celeste Simon, Abhyudai Singh, Sydney M Shaffer
Author Correction: Disrupting cellular memory to overcome drug resistance. Nature communications 15 (1) (2024)
Rocío Fernández-Fernández, David R Olivenza, Esther Weyer, Abhyudai Singh, Josep Casadesús, María Antonia Sánchez-Romero
Evolution of a bistable genetic system in fluctuating and nonfluctuating environments. Proceedings of the National Academy of Sciences of the United States of America 121 (36) (2024)
Guillaume Harmange, Raúl A Reyes Hueros, Dylan L Schaff, Benjamin Emert, Michael Saint-Antoine, Laura C Kim, Zijian Niu, Shivani Nellore, Mitchell E Fane, Gretchen M Alicea, Ashani T Weeraratna, M Celeste Simon, Abhyudai Singh, Sydney M Shaffer
Author Correction: Disrupting cellular memory to overcome drug resistance. Nature communications 15 (1) (2024)
Souvik Bhattacharyya, Shelby Lopez, Abhyudai Singh, Rasika M Harshey
Flagellar Motility is Mutagenic. bioRxiv : the preprint server for biology (2024)
Guillaume Harmange, Raúl A Reyes Hueros, Dylan L Schaff, Benjamin Emert, Michael Saint-Antoine, Laura C Kim, Zijian Niu, Shivani Nellore, Mitchell E Fane, Gretchen M Alicea, Ashani T Weeraratna, M Celeste Simon, Abhyudai Singh, Sydney M Shaffer
Author Correction: Disrupting cellular memory to overcome drug resistance. Nature communications 15 (1) (2024)
Souvik Bhattacharyya, Shelby Lopez, Abhyudai Singh, Rasika M Harshey
Flagellar Motility is Mutagenic. bioRxiv : the preprint server for biology (2024)
Guillaume Harmange, Raúl A Reyes Hueros, Dylan L Schaff, Benjamin Emert, Michael Saint-Antoine, Laura C Kim, Zijian Niu, Shivani Nellore, Mitchell E Fane, Gretchen M Alicea, Ashani T Weeraratna, M Celeste Simon, Abhyudai Singh, Sydney M Shaffer
Author Correction: Disrupting cellular memory to overcome drug resistance. Nature communications 15 (1) (2024)
Souvik Bhattacharyya, Shelby Lopez, Abhyudai Singh, Rasika M Harshey
Flagellar Motility is Mutagenic. bioRxiv : the preprint server for biology (2024)
Laura Christine Van Eyndhoven, Vincent P G Verberne, Carlijn V C Bouten, Abhyudai Singh, Jurjen Tel
Transiently heritable fates and quorum sensing drive early IFN-I response dynamics. eLife 12 (2023)
Rania Garde, Abhyudai Singh, Asif Ali, David Pincus
Transcriptional regulation of Sis1 promotes fitness but not feedback in the heat shock response. eLife 12 (2023)
Guillaume Harmange, Raúl A Reyes Hueros, Dylan L Schaff, Benjamin Emert, Michael Saint-Antoine, Laura C Kim, Zijian Niu, Shivani Nellore, Mitchell E Fane, Gretchen M Alicea, Ashani T Weeraratna, M Celeste Simon, Abhyudai Singh, Sydney M Shaffer
Disrupting cellular memory to overcome drug resistance. Nature communications 14 (1) (2023)
Mehrose Ahmad, Hannah Prensky, Jacqueline Balestrieri, Shahd ElNaggar, Angela Gomez-Simmonds, Anne-Catrin Uhlemann, Beth Traxler, Abhyudai Singh, Allison J Lopatkin
Tradeoff between lag time and growth rate drives the plasmid acquisition cost. Nature communications 14 (1) (2023)
Rania Garde, Abhyudai Singh, Asif Ali, David Pincus
Transcriptional regulation of Sis1 promotes fitness but not feedback in the heat shock response. eLife 12 (2023)
Laura Christine Van Eyndhoven, Vincent P G Verberne, Carlijn V C Bouten, Abhyudai Singh, Jurjen Tel
Transiently heritable fates and quorum sensing drive early IFN-I response dynamics. eLife 12 (2023)
Laura Christine Van Eyndhoven, Vincent P G Verberne, Carlijn V C Bouten, Abhyudai Singh, Jurjen Tel
Transiently heritable fates and quorum sensing drive early IFN-I response dynamics. eLife 12 (2023)
Mehri Monavarian, Emily Faith Page, Resha Rajkarnikar, Asha Kumari, Liz Quintero Macias, Felipe Massicano, Nam Y Lee, Sarthak Sahoo, Nadine Hempel, Mohit Kumar Jolly, Lara Ianov, Elizabeth A Worthey, Abhyudai Singh, Eugenia V Broude, Karthikeyan Mythreye
Development of adaptive anoikis resistance promotes metastasis that can be overcome by CDK8/19 Mediator kinase inhibition. bioRxiv : the preprint server for biology (2023)
Douglas E Weidemann, James Holehouse, Abhyudai Singh, Ramon Grima, Silke Hauf
The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian. Science advances 9 (32) (2023)
Laura Christine Van Eyndhoven, Vincent P G Verberne, Carlijn V C Bouten, Abhyudai Singh, Jurjen Tel
Transiently heritable fates and quorum sensing drive early IFN-I response dynamics. eLife 12 (2023)
Cesar Nieto, Cesar Augusto Vargas-Garcia, Juan Manuel Pedraza, Abhyudai Singh
Mechanisms of Cell Size Regulation in Slow-Growing Escherichia coli Cells: Discriminating Models Beyond the Adder. bioRxiv : the preprint server for biology (2023)
Douglas E Weidemann, Abhyudai Singh, Ramon Grima, Silke Hauf
The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian. bioRxiv : the preprint server for biology (2023)
Laura Christine Van Eyndhoven, Vincent P G Verberne, Carlijn V C Bouten, Abhyudai Singh, Jurjen Tel
Transiently heritable fates and quorum sensing drive early IFN-I response dynamics. eLife 12 (2023)
Mehrose Ahmad, Hannah Prensky, Jacqueline Balestrieri, Shahd ElNaggar, Angela Gomez-Simmonds, Anne-Catrin Uhlemann, Beth Traxler, Abhyudai Singh, Allison J Lopatkin
Tradeoff between lag time and growth rate drives the plasmid acquisition cost. Nature communications 14 (1) (2023)
Rania Garde, Abhyudai Singh, Asif Ali, David Pincus
Transcriptional regulation of Sis1 promotes fitness but not feedback in the heat shock response. eLife 12 (2023)
Rania Garde, Abhyudai Singh, Asif Ali, David Pincus
Transcriptional regulation of Sis1 promotes fitness but not feedback in the heat shock response. eLife 12 (2023)
Rania Garde, Abhyudai Singh, Asif Ali, David Pincus
Transcriptional regulation of Sis1 promotes fitness but not feedback in the heat shock response. eLife 12 (2023)
Abhyudai Singh
Fundamental limits of parasitoid-driven host population suppression: Implications for biological control. PloS one 18 (12) (2023)
Cesar Nieto, Sarah Täuber, Luisa Blöbaum, Zahra Vahdat, Alexander Grünberger, Abhyudai Singh
Coupling Cell Size Regulation and Proliferation Dynamics of C. glutamicum Reveals Cell Division Based on Surface Area. bioRxiv : the preprint server for biology (2023)
Souvik Bhattacharyya, Nabin Bhattarai, Dylan M Pfannenstiel, Brady Wilkins, Abhyudai Singh, Rasika M Harshey
A heritable iron memory enables decision-making in Escherichia coli . Proceedings of the National Academy of Sciences of the United States of America 120 (48) (2023)
Mehri Monavarian, Emily Faith Page, Resha Rajkarnikar, Asha Kumari, Liz Quintero Macias, Felipe Massicano, Nam Y Lee, Sarthak Sahoo, Nadine Hempel, Mohit Kumar Jolly, Lara Ianov, Elizabeth A Worthey, Abhyudai Singh, Eugenia V Broude, Karthikeyan Mythreye
Development of adaptive anoikis resistance promotes metastasis that can be overcome by CDK8/19 Mediator kinase inhibition. bioRxiv : the preprint server for biology (2023)
Cesar Nieto, Sarah Täuber, Luisa Blöbaum, Zahra Vahdat, Alexander Grünberger, Abhyudai Singh
Coupling Cell Size Regulation and Proliferation Dynamics of C. glutamicum Reveals Cell Division Based on Surface Area. bioRxiv : the preprint server for biology (2023)
Cesar Nieto, Sarah Täuber, Luisa Blöbaum, Zahra Vahdat, Alexander Grünberger, Abhyudai Singh
Coupling Cell Size Regulation and Proliferation Dynamics of C. glutamicum Reveals Cell Division Based on Surface Area. bioRxiv : the preprint server for biology (2023)
Mehrose Ahmad, Hannah Prensky, Jacqueline Balestrieri, Shahd ElNaggar, Angela Gomez-Simmonds, Anne-Catrin Uhlemann, Beth Traxler, Abhyudai Singh, Allison J Lopatkin
Tradeoff between lag time and growth rate drives the plasmid acquisition cost. Nature communications 14 (1) (2023)
Mehrose Ahmad, Hannah Prensky, Jacqueline Balestrieri, Shahd ElNaggar, Angela Gomez-Simmonds, Anne-Catrin Uhlemann, Beth Traxler, Abhyudai Singh, Allison J Lopatkin
Tradeoff between lag time and growth rate drives the plasmid acquisition cost. Nature communications 14 (1) (2023)
Mehrose Ahmad, Hannah Prensky, Jacqueline Balestrieri, Shahd ElNaggar, Angela Gomez-Simmonds, Anne-Catrin Uhlemann, Beth Traxler, Abhyudai Singh, Allison J Lopatkin
Tradeoff between lag time and growth rate drives the plasmid acquisition cost. Nature communications 14 (1) (2023)
Rania Garde, Abhyudai Singh, Asif Ali, David Pincus
Transcriptional regulation of Sis1 promotes fitness but not feedback in the heat shock response. eLife 12 (2023)
Mehrose Ahmad, Hannah Prensky, Jacqueline Balestrieri, Shahd ElNaggar, Angela Gomez-Simmonds, Anne-Catrin Uhlemann, Beth Traxler, Abhyudai Singh, Allison J Lopatkin
Tradeoff between lag time and growth rate drives the plasmid acquisition cost. Nature communications 14 (1) (2023)
Laura Christine Van Eyndhoven, Vincent P G Verberne, Carlijn V C Bouten, Abhyudai Singh, Jurjen Tel
Transiently heritable fates and quorum sensing drive early IFN-I response dynamics. eLife 12 (2023)
Mehrose Ahmad, Hannah Prensky, Jacqueline Balestrieri, Shahd ElNaggar, Angela Gomez-Simmonds, Anne-Catrin Uhlemann, Beth Traxler, Abhyudai Singh, Allison J Lopatkin
Tradeoff between lag time and growth rate drives the plasmid acquisition cost. Nature communications 14 (1) (2023)
Laura Christine Van Eyndhoven, Vincent P G Verberne, Carlijn V C Bouten, Abhyudai Singh, Jurjen Tel
Transiently heritable fates and quorum sensing drive early IFN-I response dynamics. eLife 12 (2023)
Abhyudai Singh
Fundamental limits of parasitoid-driven host population suppression: Implications for biological control. PloS one 18 (12) (2023)
Abhyudai Singh
Fundamental limits of parasitoid-driven host population suppression: Implications for biological control. PloS one 18 (12) (2023)
Sukanya Das, Abhyudai Singh, Premal Shah
Evaluating single-cell variability in proteasomal decay. bioRxiv : the preprint server for biology (2023)
Nicolas I C Müller, Isabelle Paulußen, Lina N Hofmann, Jonas O Fisch, Abhyudai Singh, Eckhard Friauf
Development of synaptic fidelity and action potential robustness at an inhibitory sound localization circuit: effects of otoferlin-related deafness. The Journal of physiology 600 (10) (2022)
Chen Jia, Abhyudai Singh, Ramon Grima
Characterizing non-exponential growth and bimodal cell size distributions in fission yeast: An analytical approach. PLoS computational biology 18 (1) (2022)
Shahla Nemati, Abhyudai Singh, Scott D Dhuey, Armando G McDonald, Daniel M Weinreich, Andreas E Vasdekis
Density fluctuations, homeostasis, and reproduction effects in bacteria. Communications biology 5 (1) (2022)
Abhyudai Singh
A comparative approach to stabilizing mechanisms between discrete- and continuous-time consumer-resource models. PloS one 17 (4) (2022)
Hannah E Opalko, Kristi E Miller, Hyun-Soo Kim, Cesar Augusto Vargas-Garcia, Abhyudai Singh, Michael-Christopher Keogh, James B Moseley
Arf6 anchors Cdr2 nodes at the cell cortex to control cell size at division. The Journal of cell biology 221 (2) (2021)
Helen R Clark, Connor McKenney, Nathan M Livingston, Ariel Gershman, Seema Sajjan, Isaac S Chan, Andrew J Ewald, Winston Timp, Bin Wu, Abhyudai Singh, Sergi Regot
Epigenetically regulated digital signaling defines epithelial innate immunity at the tissue level. Nature communications 12 (1) (2021)
LaTasha C R Fraser, Ryan J Dikdan, Supravat Dey, Abhyudai Singh, Sanjay Tyagi
Reduction in gene expression noise by targeted increase in accessibility at gene loci. Proceedings of the National Academy of Sciences of the United States of America 118 (42) (2021)
Kora-Lee Claude, Daniela Bureik, Dimitra Chatzitheodoridou, Petia Adarska, Abhyudai Singh, Kurt M Schmoller
Transcription coordinates histone amounts and genome content. Nature communications 12 (1) (2021)
Abhyudai Singh
Stochastic dynamics of predator-prey interactions. PloS one 16 (8) (2021)
José E Pérez-Ortín, Adriana Mena, Marina Barba-Aliaga, Abhyudai Singh, Sebastián Chávez, José García-Martínez
Cell volume homeostatically controls the rDNA repeat copy number and rRNA synthesis rate in yeast. PLoS genetics 17 (4) (2021)
Saurabh Modi, Supravat Dey, Abhyudai Singh
Noise suppression in stochastic genetic circuits using PID controllers. PLoS computational biology 17 (7) (2021)
Michi Miura, Supravat Dey, Saumya Ramanayake, Abhyudai Singh, David S Rueda, Charles R M Bangham
Kinetics of HTLV-1 reactivation from latency quantified by single-molecule RNA FISH and stochastic modelling. PLoS pathogens 15 (11) (2019)
Dana O Robinson, Jeremy E Coate, Abhyudai Singh, Lilan Hong, Max Bush, Jeff J Doyle, Adrienne H K Roeder
Ploidy and Size at Multiple Scales in the Arabidopsis Sepal. The Plant cell 30 (10) (2018)
Mohammad Soltani, Abhyudai Singh
Effects of cell-cycle-dependent expression on random fluctuations in protein levels. Royal Society open science 3 (12) (2016)