PLoS genetics

Keyphrases

Publications

volume 19, number 8, 2023

Timo A Kumpula, Sandra Vorimo, Taneli T Mattila, Luke O'Gorman, Galuh Astuti, Anna Tervasmäki, Susanna Koivuluoma, Tiina M Mattila, Mervi Grip, Robert Winqvist, Outi Kuismin, Jukka S Moilanen, Alexander Hoischen, Christian Gilissen, Tuomo Mantere, Katri Pylkäs
Exome sequencing identified rare recurrent copy number variants and hereditary breast cancer susceptibility. PLoS genetics 19 (8) (2023)
Mariame Diabate, Muhtadi M Islam, Gregory Nagy, Tapahsama Banerjee, Shruti Dhar, Nahum Smith, Aleksandra I Adamovich, Lea M Starita, Jeffrey D Parvin
DNA repair function scores for 2172 variants in the BRCA1 amino-terminus. PLoS genetics 19 (8) (2023)
Elizabeth T Chevy, Emilia Huerta-Sánchez, Sohini Ramachandran
Integrating sex-bias into studies of archaic introgression on chromosome X. PLoS genetics 19 (8) (2023)
Thomas W Willis, Chris Wallace
Accurate detection of shared genetic architecture from GWAS summary statistics in the small-sample context. PLoS genetics 19 (8) (2023)
Marcus D Kilwein, T Kim Dao, Michael Andreas Welte
Drosophila embryos allocate lipid droplets to specific lineages to ensure punctual development and redox homeostasis. PLoS genetics 19 (8) (2023)
Yi-Ting Tsai, Chen-Hsi Chang, Hsin-Yue Tsai
Rege-1 promotes C. elegans survival by modulating IIS and TOR pathways. PLoS genetics 19 (8) (2023)

volume 19, number 9, 2023

Pavel Flegontov, Ulaş Işıldak, Robert Maier, Eren Yüncü, Piya Changmai, David Reich
Modeling of African population history using f-statistics is biased when applying all previously proposed SNP ascertainment schemes. PLoS genetics 19 (9) (2023)
Leo Zeitler, Christian Parisod, Kimberly J Gilbert
Purging due to self-fertilization does not prevent accumulation of expansion load. PLoS genetics 19 (9) (2023)
Kriti Gupta, Sveta Chakrabarti, Vishnu Janardan, Nishita Gogia, Sanghita Banerjee, Swarna Srinivas, Deepthi Mahishi, Sandhya Srikant Visweswariah
Neuronal expression in Drosophila of an evolutionarily conserved metallophosphodiesterase reveals pleiotropic roles in longevity and odorant response. PLoS genetics 19 (9) (2023)
Xiaoxu Shen, Xiyu Zhao, Haorong He, Jing Zhao, Yuanhang Wei, Yuqi Chen, Shunshun Han, Yifeng Zhu, Yao Zhang, Qing Zhu, Huadong Yin
Evolutionary conserved circular MEF2A RNAs regulate myogenic differentiation and skeletal muscle development. PLoS genetics 19 (9) (2023)
Hannah J Smith, Anne Lanjuin, Arpit Sharma, Aditi Prabhakar, Ewelina Nowak, Peter G Stine, Rohan Sehgal, Klement Stojanovski, Benjamin D Towbin, William B Mair
Neuronal mTORC1 inhibition promotes longevity without suppressing anabolic growth and reproduction in C. elegans. PLoS genetics 19 (9) (2023)
Naveen Shankar, Preethi Sunkara, Utpal Nath
A double-negative feedback loop between miR319c and JAW-TCPs establishes growth pattern in incipient leaf primordia in Arabidopsis thaliana. PLoS genetics 19 (9) (2023)
Ana Roca-Umbert, Jorge Garcia-Calleja, Marina Vogel-González, Alejandro Fierro-Villegas, Gerard Ill-Raga, Víctor Herrera-Fernández, Anja Bosnjak, Gerard Muntané, Esteban Gutiérrez, Felix Campelo, Rubén Vicente, Elena Bosch
Human genetic adaptation related to cellular zinc homeostasis. PLoS genetics 19 (9) (2023)
Mareike Möller, John B Ridenour, Devin F Wright, Faith A Martin, Michael Freitag
H4K20me3 is important for Ash1-mediated H3K36me3 and transcriptional silencing in facultative heterochromatin in a fungal pathogen. PLoS genetics 19 (9) (2023)
Meng-Xi Liu, Zekai Li, Jing Chen, Jinying Lin, Qiuhua Lu, Yangmiao Ye, Hongmin Zhang, Bo Zhang, Songying Ouyang
Structural transitions upon guide RNA binding and their importance in Cas12g-mediated RNA cleavage. PLoS genetics 19 (9) (2023)
null null
Expression of Concern: PHYTOCHROME C regulation of photoperiodic flowering via PHOTOPERIOD1 is mediated by EARLY FLOWERING 3 in Brachypodium distachyon. PLoS genetics 19 (9) (2023)
Quentin Rougemont, Thibault Leroy, Eric B Rondeau, Ben Koop, Louis Bernatchez
Allele surfing causes maladaptation in a Pacific salmon of conservation concern. PLoS genetics 19 (9) (2023)
Amanda Forde, Gibran Hemani, John Ferguson
Review and further developments in statistical corrections for Winner's Curse in genetic association studies. PLoS genetics 19 (9) (2023)
Vlastimil Smykal, Lenka Chodakova, Marketa Hejnikova, Kristina Briedikova, Bulah Chia-Hsiang Wu, Hana Vaneckova, Ping Chen, Anna Janovska, Pavlina Kyjakova, Martin Vacha, David Dolezel
Steroid receptor coactivator TAIMAN is a new modulator of insect circadian clock. PLoS genetics 19 (9) (2023)
Masahiro Tomioka, Yusuke Umemura, Yutaro Ueoka, Risshun Chin, Keita Katae, Chihiro Uchiyama, Yasuaki Ike, Yuichi Iino
Antagonistic regulation of salt and sugar chemotaxis plasticity by a single chemosensory neuron in Caenorhabditis elegans. PLoS genetics 19 (9) (2023)
Eleanor G Clark, Christian P Petersen
BMP suppresses WNT to integrate patterning of orthogonal body axes in adult planarians. PLoS genetics 19 (9) (2023)
Ana Catalán, Justin Merondun, Ulrich Knief, Jochen B W Wolf
Chromatin accessibility, not 5mC methylation covaries with partial dosage compensation in crows. PLoS genetics 19 (9) (2023)
David Melamed, Aaron Choi, Amy Reilein, Simon Tavare, Daniel Kalderon
Spatial regulation of Drosophila ovarian Follicle Stem Cell division rates and cell cycle transitions. PLoS genetics 19 (9) (2023)
Jovana Kaljević, Coralie Tesseur, Tung B K Le, Géraldine Laloux
Cell cycle-dependent organization of a bacterial centromere through multi-layered regulation of the ParABS system. PLoS genetics 19 (9) (2023)
Xiang Wen, Kaiyang Feng, Juan Qin, Peng Wei, Peng Cao, You-Jun Zhang, Zhiguang Yuchi, Lin He
A detoxification pathway initiated by a nuclear receptor TcHR96h in Tetranychus cinnabarinus (Boisduval). PLoS genetics 19 (9) (2023)
Jianxin Xie, Wei Zou, Madina Tugizova, Kang Shen, Xiangming Wang
MBL-1 and EEL-1 affect the splicing and protein levels of MEC-3 to control dendrite complexity. PLoS genetics 19 (9) (2023)
Dongwei Xu, Alec Vincent, Andrés González-Gutiérrez, Benjamin Aleyakpo, Sharifah Anoar, Ashling Giblin, Magda L Atilano, Mirjam Adams, Dunxin Shen, Annora Thoeng, Elli Tsintzas, Marie Maeland, Adrian M Isaacs, Jimena Sierralta, Teresa Niccoli
A monocarboxylate transporter rescues frontotemporal dementia and Alzheimer's disease models. PLoS genetics 19 (9) (2023)
null null
Expression of Concern: MiR172-APETALA2-like genes integrate vernalization and plant age to control flowering time in wheat. PLoS genetics 19 (9) (2023)
Gareth Hawkes, Loic Yengo, Sailaja Vedantam, Eirini Marouli, Robin N Beaumont, null null, Jessica Tyrrell, Michael N Weedon, Joel Hirschhorn, Timothy M Frayling, Andrew R Wood
Identification and analysis of individuals who deviate from their genetically-predicted phenotype. PLoS genetics 19 (9) (2023)
Susanna K Birnbaum, Jennifer D Cohen, Alexandra Belfi, John Isaac Murray, Jennifer R G Adams, Andrew D Chisholm, Meera V Sundaram
The proprotein convertase BLI-4 promotes collagen secretion prior to assembly of the Caenorhabditis elegans cuticle. PLoS genetics 19 (9) (2023)
Nurlan Kerimov, Ralf Tambets, James D Hayhurst, Ida Rahu, Peep Kolberg, Uku Raudvere, Ivan Kuzmin, Anshika Chowdhary, Andreas Vija, Hans J Teras, Masahiro Kanai, Jacob Ulirsch, Mina Ryten, John Hardy, Sebastian Guelfi, Daniah Trabzuni, Sarah Kim-Hellmuth, William Rayner, Hilary Finucane, Hedi Peterson, Abayomi Mosaku, Helen Parkinson, Kaur Alasoo
eQTL Catalogue 2023: New datasets, X chromosome QTLs, and improved detection and visualisation of transcript-level QTLs. PLoS genetics 19 (9) (2023)
Mickaël Maziero, David Lane, Patrice Polard, Mathieu Bergé
Fever-like temperature bursts promote competence development via an HtrA-dependent pathway in Streptococcus pneumoniae. PLoS genetics 19 (9) (2023)
Yue Zhai, Xin Zhang, Cheng Zhao, Ruijing Geng, Kun Wu, Mingzhe Yuan, Nana Ai, Wei Ge
Rescue of bmp15 deficiency in zebrafish by mutation of inha reveals mechanisms of BMP15 regulation of folliculogenesis. PLoS genetics 19 (9) (2023)
Jiacheng Wang, Yaojia Chen, Guishen Wang
Inferring gene regulatory network from single-cell transcriptomes with graph autoencoder model. PLoS genetics 19 (9) (2023)
Christiaan A de Leeuw, Josefin Werme, Jeanne E Savage, Wouter J Peyrot, Danielle Posthuma
On the interpretation of transcriptome-wide association studies. PLoS genetics 19 (9) (2023)
Abigail DiVito Evans, Regina A Fairbanks, Paul S Schmidt, Mia T Levine
Histone methylation regulates reproductive diapause in Drosophila melanogaster. PLoS genetics 19 (9) (2023)
Corinna A Moro, Sabrina A Sony, Latisha P Franklin, Shirley Dong, Mia M Peifer, Kathryn E Wittig, Wendy Hanna-Rose
Adenylosuccinate lyase deficiency affects neurobehavior via perturbations to tyramine signaling in Caenorhabditis elegans. PLoS genetics 19 (9) (2023)
Takashi Kiuchi, Keisuke Shoji, Natsuko Izumi, Yukihide Tomari, Susumu Katsuma
Non-gonadal somatic piRNA pathways ensure sexual differentiation, larval growth, and wing development in silkworms. PLoS genetics 19 (9) (2023)
null null
Correction: A novel nematode species from the Siberian permafrost shares adaptive mechanisms for cryptobiotic survival with C. elegans dauer larva. PLoS genetics 19 (9) (2023)
Jingfan Liu, Tian Zheng, Dandan Chen, Junjiu Huang, Yong Zhao, Wenbin Ma, Haiying Liu
RBMX involves in telomere stability maintenance by regulating TERRA expression. PLoS genetics 19 (9) (2023)
Bernadett Bosze, Julissa Suarez-Navarro, Illiana Cajias, Joseph A Brzezinski, Nadean L Brown
Notch pathway mutants do not equivalently perturb mouse embryonic retinal development. PLoS genetics 19 (9) (2023)
Miki Tokuoka, Yutaka Satou
A digital twin reproducing gene regulatory network dynamics of early Ciona embryos indicates robust buffers in the network. PLoS genetics 19 (9) (2023)
Sarah Krupp, Isabel Hubbard, Oliver Tam, Molly Gale Hammell, Josh Dubnau
TDP-43 pathology in Drosophila induces glial-cell type specific toxicity that can be ameliorated by knock-down of SF2/SRSF1. PLoS genetics 19 (9) (2023)
Nils Kalbfuß, Alexander Strohmayr, Marcel Kegel, Lien Le, Friederike Grosse-Holz, Barbara Brunschweiger, Katharina Stöckl, Christian Wiese, Carina Franke, Caroline Schiestl, Sophia Prem, Shuyao Sha, Katrin Franz-Oberdorf, Juliane Hafermann, Marc Thiemé, Eva Facher, Wojciech Palubicki, Cordelia Bolle, Farhah F Assaad
Correction: A role for brassinosteroid signalling in decision-making processes in the Arabidopsis seedling. PLoS genetics 19 (9) (2023)
Jingxiong Xu, Wei Xu, Jiyeon Choi, Yonathan Brhane, David C Christiani, Jui Kothari, James McKay, John K Field, Michael P A Davies, Geoffrey Liu, Christopher I Amos, Rayjean J Hung, Laurent Briollais
Large-scale whole exome sequencing studies identify two genes,CTSL and APOE, associated with lung cancer. PLoS genetics 19 (9) (2023)
Maria Di Bonito, Jérôme Bourien, Monica Tizzano, Anne-Gabrielle Harrus, Jean-Luc Puel, Bice Avallone, Regis Nouvian, Michèle Studer
Abnormal outer hair cell efferent innervation in Hoxb1-dependent sensorineural hearing loss. PLoS genetics 19 (9) (2023)
Huimin Li, Pengcheng Mo, Jun Zhang, Zhuoer Xie, Xinyu Liu, Han Chen, Leiyun Yang, Muxing Liu, Haifeng Zhang, Ping Wang, Zhengguang Zhang
Methionine biosynthesis enzyme MoMet2 is required for rice blast fungus pathogenicity by promoting virulence gene expression via reducing 5mC modification. PLoS genetics 19 (9) (2023)
Calum A Graham, Pirita Paajanen, Keith J Edwards, Antony N Dodd
Genome-wide circadian gating of a cold temperature response in bread wheat. PLoS genetics 19 (9) (2023)
Sounak Sahu, Teresa L Sullivan, Alexander Y Mitrophanov, Mélissa Galloux, Darryl Nousome, Eileen Southon, Dylan Caylor, Arun Prakash Mishra, Christine N Evans, Michelle E Clapp, Sandra Sczerba Burkett, Tyler Malys, Raj Chari, Kajal Biswas, Shyam K Sharan
Saturation genome editing of 11 codons and exon 13 of BRCA2 coupled with chemotherapeutic drug response accurately determines pathogenicity of variants. PLoS genetics 19 (9) (2023)
D Herbert Opi, Carolyne M Ndila, Sophie Uyoga, Alex W Macharia, Clare Fennell, Lucy B Ochola, Gideon Nyutu, Bethseba R Siddondo, John Ojal, Mohammed Shebe, Kennedy O Awuondo, Neema Mturi, Norbert Peshu, Benjamin Tsofa, Gavin Band, Kathryn Maitland, Dominic P Kwiatkowski, Kirk A Rockett, Thomas N Williams, J Alexandra Rowe
Non-O ABO blood group genotypes differ in their associations with Plasmodium falciparum rosetting and severe malaria. PLoS genetics 19 (9) (2023)