Aleksey V Zimin (Aleksey Zimin)

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 9

Top Topics

Dna Methylation

Genome Wide Association Study

Top Venues

PLoS computational biology

Genome research

Science advances

This page only lists publications with an associated author ORCID identifier.

Publications

Markus J Sommer, Aleksey V Zimin, Steven L Salzberg
PSAURON: a tool for assessing protein annotation across a broad range of species. bioRxiv : the preprint server for biology (2024)
Alina Guo, Steven L Salzberg, Aleksey V Zimin
JASPER: A fast genome polishing tool that improves accuracy of genome assemblies. PLoS computational biology 19 (3) (2023)
Aleksey V Zimin, Steven L Salzberg
The SAMBA tool uses long reads to improve the contiguity of genome assemblies. PLoS computational biology 18 (2) (2022)
Jennifer M Polinski, Aleksey V Zimin, K Fraser Clark, Andrea B Kohn, Norah Sadowski, Winston Timp, Andrey Ptitsyn, Prarthana Khanna, Daria Y Romanova, Peter Williams, Spencer J Greenwood, Leonid L Moroz, David R Walt, Andrea G Bodnar
The American lobster genome reveals insights on longevity, neural, and immune adaptations. Science advances 7 (26) (2021)
Aleksey V Zimin, Steven L Salzberg
The genome polishing tool POLCA makes fast and accurate corrections in genome assemblies. PLoS computational biology 16 (6) (2020)
Michael Alonge, Alaina Shumate, Daniela Puiu, Aleksey V Zimin, Steven L Salzberg
Chromosome-Scale Assembly of the Bread Wheat Genome Reveals Thousands of Additional Gene Copies. Genetics 216 (2) (2020)
Andrew C Read, Matthew J Moscou, Aleksey V Zimin, Geo Pertea, Rachel S Meyer, Michael D Purugganan, Jan E Leach, Lindsay R Triplett, Steven L Salzberg, Adam J Bogdanove
Genome assembly and characterization of a complex zfBED-NLR gene-containing disease resistance locus in Carolina Gold Select rice with Nanopore sequencing. PLoS genetics 16 (1) (2020)
Florian P Breitwieser, Mihaela Pertea, Aleksey V Zimin, Steven L Salzberg
Human contamination in bacterial genomes has created thousands of spurious proteins. Genome research 29 (6) (2019)
Guillaume Marçais, Arthur L Delcher, Adam M Phillippy, Rachel Coston, Steven L Salzberg, Aleksey V Zimin
MUMmer4: A fast and versatile genome alignment system. PLoS computational biology 14 (1) (2018)