Alex Gavryushkin

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 23

Top Venues

Bulletin of mathematical biology

PLoS computational biology

Journal of mathematical biology

Bioinformatics (Oxford, England)

ETH Zürich

Novosibirsk State University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

ETH Zürich Aug 01 2016 - Jan 31 2018

Switzerland

Research Fellow :: Department of Biosystems Science and Engineering

The University of Auckland Feb 20 2012 - Jul 29 2016

New Zealand

Research Fellow :: Centre for Computational Evolution

Education History

Novosibirsk State University Sep 01 2006 - Jun 18 2009

Russia

PHD :: Faculty of Mathematics and Mechanics

Publications

Lena Collienne, Chris Whidden, Alex Gavryushkin
Ranked Subtree Prune and Regraft. Bulletin of mathematical biology 86 (3) (2024)
Lars Berling, Lena Collienne, Alex Gavryushkin
Estimating the mean in the space of ranked phylogenetic trees. Bioinformatics (Oxford, England) 40 (8) (2024)
Lena Collienne, Chris Whidden, Alex Gavryushkin
Ranked Subtree Prune and Regraft. Bulletin of mathematical biology 86 (3) (2024)
Lena Collienne, Chris Whidden, Alex Gavryushkin
Ranked Subtree Prune and Regraft. Bulletin of mathematical biology 86 (3) (2024)
Lena Collienne, Chris Whidden, Alex Gavryushkin
Ranked Subtree Prune and Regraft. Bulletin of mathematical biology 86 (3) (2024)
Lena Collienne, Chris Whidden, Alex Gavryushkin
Ranked Subtree Prune and Regraft. Bulletin of mathematical biology 86 (3) (2024)
Lena Collienne, Chris Whidden, Alex Gavryushkin
Ranked Subtree Prune and Regraft. Bulletin of mathematical biology 86 (3) (2024)
Lena Collienne, Chris Whidden, Alex Gavryushkin
Ranked Subtree Prune and Regraft. Bulletin of mathematical biology 86 (3) (2024)
Lars Berling, Lena Collienne, Alex Gavryushkin
Estimating the mean in the space of ranked phylogenetic trees. Bioinformatics (Oxford, England) 40 (8) (2024)
Lena Collienne, Chris Whidden, Alex Gavryushkin
Ranked Subtree Prune and Regraft. Bulletin of mathematical biology 86 (3) (2024)
Kieran Elmes, Astra Heywood, Zhiyi Huang, Alex Gavryushkin
A fast lasso-based method for inferring higher-order interactions. PLoS computational biology 18 (12) (2022)
Ryan M Powell, Sharon Pattison, Jiri C Moravec, Basharat Bhat, Nada Guirguis, David Markie, Greg T Jones, Jason Copedo, Cristin G Print, Ian M Morison, Alex Gavryushkin, Bronwyn Gray, Lisa J Wyeth, Michael R Eccles, Erin C Macaulay
Tuberous sclerosis complex: a complex case. Cold Spring Harbor molecular case studies 8 (3) (2022)
Kieran Elmes, Astra Heywood, Zhiyi Huang, Alex Gavryushkin
A fast lasso-based method for inferring higher-order interactions. PLoS computational biology 18 (12) (2022)
Kieran Elmes, Astra Heywood, Zhiyi Huang, Alex Gavryushkin
A fast lasso-based method for inferring higher-order interactions. PLoS computational biology 18 (12) (2022)
Kylie Chen, Jiří C Moravec, Alex Gavryushkin, David Welch, Alexei J Drummond
Accounting for Errors in Data Improves Divergence Time Estimates in Single-cell Cancer Evolution. Molecular biology and evolution 39 (8) (2022)
Kieran Elmes, Astra Heywood, Zhiyi Huang, Alex Gavryushkin
A fast lasso-based method for inferring higher-order interactions. PLoS computational biology 18 (12) (2022)
Kieran Elmes, Astra Heywood, Zhiyi Huang, Alex Gavryushkin
A fast lasso-based method for inferring higher-order interactions. PLoS computational biology 18 (12) (2022)
Kieran Elmes, Fabian Schmich, Ewa Szczurek, Jeremy L Jenkins, Niko Beerenwinkel, Alex Gavryushkin
Learning epistatic gene interactions from perturbation screens. PloS one 16 (7) (2021)
Lena Collienne, Alex Gavryushkin
Computing nearest neighbour interchange distances between ranked phylogenetic trees. Journal of mathematical biology 82 (1-2) (2021)
Lena Collienne, Kieran Elmes, Mareike Fischer, David Bryant, Alex Gavryushkin
Discrete coalescent trees. Journal of mathematical biology 83 (5) (2021)
Caitlin Lienkaemper, Lisa Lamberti, James Drain, Niko Beerenwinkel, Alex Gavryushkin
The geometry of partial fitness orders and an efficient method for detecting genetic interactions. Journal of mathematical biology 77 (4) (2018)
Alex Gavryushkin, Chris Whidden, Frederick A Matsen
The combinatorics of discrete time-trees: theory and open problems. Journal of mathematical biology 76 (5) (2017)
Kristina Crona, Alex Gavryushkin, Devin Greene, Niko Beerenwinkel
Inferring genetic interactions from comparative fitness data. eLife 6 (2017)

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Publication Activity (10 Years)

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Alex Gavryushkin