Alex J Walsh

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 22

Top Venues

PloS one

bioRxiv : the preprint server for biology

APL bioengineering

Journal of biomedical optics

Texas A&M University

Vanderbilt University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Texas A&M University

United States

Assistant Professor :: Biomedical Engineering

Morgridge Institute for Research

United States

Assistant Scientist :: Medical Engineering

Education History

Vanderbilt University

United States

PHD :: Biomedical Engineering

Vanderbilt University

United States

MSC :: Biomedical Engineering

Publications

Oscar R Benavides, Berkley P White, Holly C Gibbs, Roland Kaunas, Carl A Gregory, Kristen C Maitland, Alex J Walsh
Comparison of polystyrene and hydrogel microcarriers for optical imaging of adherent cells. Journal of biomedical optics 29 (Suppl 2) (2024)
Linghao Hu, Daniela De Hoyos, Yuanjiu Lei, Andrew Phillip West, Alex J Walsh
3D convolutional neural networks predict cellular metabolic pathway use from fluorescence lifetime decay data. APL bioengineering 8 (1) (2024)
Linghao Hu, Daniela De Hoyos, Yuanjiu Lei, Andrew Phillip West, Alex J Walsh
3D convolutional neural networks predict cellular metabolic pathway use from fluorescence lifetime decay data. APL bioengineering 8 (1) (2024)
Oscar R Benavides, Berkley P White, Holly C Gibbs, Roland Kaunas, Carl A Gregory, Kristen C Maitland, Alex J Walsh
Comparison of polystyrene and hydrogel microcarriers for optical imaging of adherent cells. Journal of biomedical optics 29 (Suppl 2) (2024)
Linghao Hu, Daniela De Hoyos, Yuanjiu Lei, Andrew Phillip West, Alex J Walsh
3D convolutional neural networks predict cellular metabolic pathway use from fluorescence lifetime decay data. APL bioengineering 8 (1) (2024)
Linghao Hu, Daniela De Hoyos, Yuanjiu Lei, Andrew Phillip West, Alex J Walsh
3D convolutional neural networks predict cellular metabolic pathway use from fluorescence lifetime decay data. APL bioengineering 8 (1) (2024)
Nianchao Wang, Linghao Hu, Alex J Walsh
POSEA: A novel algorithm to evaluate the performance of multi-object instance image segmentation. PloS one 18 (3) (2023)
Oscar R Benavides, Holly C Gibbs, Berkley P White, Roland Kaunas, Carl A Gregory, Alex J Walsh, Kristen C Maitland
Volumetric imaging of human mesenchymal stem cells (hMSCs) for non-destructive quantification of 3D cell culture growth. PloS one 18 (3) (2023)
Nianchao Wang, Linghao Hu, Alex J Walsh
POSEA: A novel algorithm to evaluate the performance of multi-object instance image segmentation. PloS one 18 (3) (2023)
Nianchao Wang, Linghao Hu, Alex J Walsh
POSEA: A novel algorithm to evaluate the performance of multi-object instance image segmentation. PloS one 18 (3) (2023)
Rebecca L Schmitz, Kelsey E Tweed, Peter Rehani, Kayvan Samimi, Jeremiah Riendeau, Isabel Jones, Elizabeth M Maly, Emmanuel Contreras Guzman, Matthew H Forsberg, Ankita Shahi, Christian M Capitini, Alex J Walsh, Melissa C Skala
Autofluorescence lifetime imaging classifies human lymphocyte activation and subtype. bioRxiv : the preprint server for biology (2023)
Rebecca L Schmitz, Kelsey E Tweed, Peter Rehani, Kayvan Samimi, Jeremiah Riendeau, Isabel Jones, Elizabeth M Maly, Emmanuel Contreras Guzman, Matthew H Forsberg, Ankita Shahi, Christian M Capitini, Alex J Walsh, Melissa C Skala
Autofluorescence lifetime imaging classifies human lymphocyte activation and subtype. bioRxiv : the preprint server for biology (2023)
Oscar R Benavides, Holly C Gibbs, Berkley P White, Roland Kaunas, Carl A Gregory, Alex J Walsh, Kristen C Maitland
Volumetric imaging of human mesenchymal stem cells (hMSCs) for non-destructive quantification of 3D cell culture growth. PloS one 18 (3) (2023)
Oscar R Benavides, Holly C Gibbs, Berkley P White, Roland Kaunas, Carl A Gregory, Alex J Walsh, Kristen C Maitland
Volumetric imaging of human mesenchymal stem cells (hMSCs) for non-destructive quantification of 3D cell culture growth. PloS one 18 (3) (2023)
Rebecca L Schmitz, Kelsey E Tweed, Peter Rehani, Kayvan Samimi, Jeremiah Riendeau, Isabel Jones, Elizabeth M Maly, Emmanuel Contreras Guzman, Matthew H Forsberg, Ankita Shahi, Christian M Capitini, Alex J Walsh, Melissa C Skala
Autofluorescence lifetime imaging classifies human lymphocyte activation and subtype. bioRxiv : the preprint server for biology (2023)
Rebecca L Schmitz, Kelsey E Tweed, Peter Rehani, Kayvan Samimi, Jeremiah Riendeau, Isabel Jones, Elizabeth M Maly, Emmanuel Contreras Guzman, Matthew H Forsberg, Ankita Shahi, Christian M Capitini, Alex J Walsh, Melissa C Skala
Autofluorescence lifetime imaging classifies human lymphocyte activation and subtype. bioRxiv : the preprint server for biology (2023)
Veronika Miskolci, Kelsey E Tweed, Michael R Lasarev, Emily C Britt, Alex J Walsh, Landon J Zimmerman, Courtney E McDougal, Mark R Cronan, Jing Fan, John-Demian Sauer, Melissa C Skala, Anna Huttenlocher
In vivo fluorescence lifetime imaging of macrophage intracellular metabolism during wound responses in zebrafish. eLife 11 (2022)
Elizabeth N Cardona, Alex J Walsh
Identification of rare cell populations in autofluorescence lifetime image data. Cytometry. Part A : the journal of the International Society for Analytical Cytology 101 (6) (2022)
Woojong Lee, Brock Kingstad-Bakke, Brett Paulson, Autumn Larsen, Katherine A Overmyer, Chandranaik B Marinaik, Kelly Dulli, Randall Toy, Gabriela Vogel, Katherine P Mueller, Kelsey Tweed, Alex J Walsh, Jason Russell, Krishanu Saha, Leticia Reyes, Melissa C Skala, John-Demian Sauer, Dmitry M Shayakhmetov, Joshua J Coon, Krishnendu Roy, Marulasiddappa Suresh
Carbomer-based adjuvant elicits CD8 T-cell immunity by inducing a distinct metabolic state in cross-presenting dendritic cells. PLoS pathogens 17 (1) (2021)
Linghao Hu, Nianchao Wang, Elizabeth Cardona, Alex J Walsh
Fluorescence intensity and lifetime redox ratios detect metabolic perturbations in T cells. Biomedical optics express 11 (10) (2020)
Alex J Walsh, Katherine P Mueller, Kelsey Tweed, Isabel Jones, Christine M Walsh, Nicole J Piscopo, Natalie M Niemi, David J Pagliarini, Krishanu Saha, Melissa C Skala
Classification of T-cell activation via autofluorescence lifetime imaging. Nature biomedical engineering 5 (1) (2020)
Zijie J Wang, Alex J Walsh, Melissa C Skala, Anthony Gitter
Classifying T cell activity in autofluorescence intensity images with convolutional neural networks. Journal of biophotonics 13 (3) (2019)

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Publication Activity (10 Years)

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Alex J Walsh