Alexander G Ioannidis (Alexander Ioannidis)

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 17

Top Topics

Machine Learning

Dna Methylation

Respiratory Syndrome Coronavirus

Top Venues

Science (New York, N.Y.)

Genome biology and evolution

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Ram González-Buenfil, Sofía Vieyra-Sánchez, Consuelo D Quinto-Cortés, Stephen J Oppenheimer, William Pomat, Moses Laman, Mayté C Cervantes-Hernández, Carmina Barberena-Jonas, Kathryn Auckland, Angela Allen, Stephen J Allen, Maude E Phipps, Emilia Huerta-Sánchez, Alexander G Ioannidis, Alexander J Mentzer, Andrés Moreno-Estrada
Genetic Signatures of Positive Selection in Human Populations Adapted to High Altitude in Papua New Guinea. Genome biology and evolution 16 (8) (2024)
Ram González-Buenfil, Sofía Vieyra-Sánchez, Consuelo D Quinto-Cortés, Stephen J Oppenheimer, William Pomat, Moses Laman, Mayté C Cervantes-Hernández, Carmina Barberena-Jonas, Kathryn Auckland, Angela Allen, Stephen J Allen, Maude E Phipps, Emilia Huerta-Sánchez, Alexander G Ioannidis, Alexander J Mentzer, Andrés Moreno-Estrada
Genetic Signatures of Positive Selection in Human Populations Adapted to High Altitude in Papua New Guinea. Genome biology and evolution 16 (8) (2024)
Viridiana Villa-Islas, Alan Izarraras-Gomez, Maximilian Larena, Elizabeth Mejía Perez Campos, Marcela Sandoval Velasco, Juan Esteban Rodríguez-Rodríguez, Miriam J Bravo-Lopez, Barbara Moguel, Rosa Irene Fregel Lorenzo, Ernesto Garfias-Morales, Jazeps Medina Tretmanis, David Alberto Velázquez-Ramírez, Alberto Herrera-Muñóz, Karla Sandoval, Maria A Nieves-Colón, Gabriela Zepeda García Moreno, Fernando A Villanea, Eugenia Fernández Villanueva Medina, Ramiro Aguayo-Haro, Cristina Valdiosera, Alexander G Ioannidis, Andrés Moreno-Estrada, Flora Jay, Emilia Huerta-Sánchez, J Víctor Moreno-Mayar, Federico Sánchez Quinto, María C Ávila Arcos
Demographic history and genetic structure in pre-Hispanic Central Mexico. Science (New York, N.Y.) 380 (6645) (2023)
Viridiana Villa-Islas, Alan Izarraras-Gomez, Maximilian Larena, Elizabeth Mejía Perez Campos, Marcela Sandoval Velasco, Juan Esteban Rodríguez-Rodríguez, Miriam J Bravo-Lopez, Barbara Moguel, Rosa Irene Fregel Lorenzo, Ernesto Garfias-Morales, Jazeps Medina Tretmanis, David Alberto Velázquez-Ramírez, Alberto Herrera-Muñóz, Karla Sandoval, Maria A Nieves-Colón, Gabriela Zepeda García Moreno, Fernando A Villanea, Eugenia Fernández Villanueva Medina, Ramiro Aguayo-Haro, Cristina Valdiosera, Alexander G Ioannidis, Andrés Moreno-Estrada, Flora Jay, Emilia Huerta-Sánchez, J Víctor Moreno-Mayar, Federico Sánchez Quinto, María C Ávila Arcos
Demographic history and genetic structure in pre-Hispanic Central Mexico. Science (New York, N.Y.) 380 (6645) (2023)
Viridiana Villa-Islas, Alan Izarraras-Gomez, Maximilian Larena, Elizabeth Mejía Perez Campos, Marcela Sandoval Velasco, Juan Esteban Rodríguez-Rodríguez, Miriam J Bravo-Lopez, Barbara Moguel, Rosa Irene Fregel Lorenzo, Ernesto Garfias-Morales, Jazeps Medina Tretmanis, David Alberto Velázquez-Ramírez, Alberto Herrera-Muñóz, Karla Sandoval, Maria A Nieves-Colón, Gabriela Zepeda García Moreno, Fernando A Villanea, Eugenia Fernández Villanueva Medina, Ramiro Aguayo-Haro, Cristina Valdiosera, Alexander G Ioannidis, Andrés Moreno-Estrada, Flora Jay, Emilia Huerta-Sánchez, J Víctor Moreno-Mayar, Federico Sánchez Quinto, María C Ávila Arcos
Demographic history and genetic structure in pre-Hispanic Central Mexico. Science (New York, N.Y.) 380 (6645) (2023)
Viridiana Villa-Islas, Alan Izarraras-Gomez, Maximilian Larena, Elizabeth Mejía Perez Campos, Marcela Sandoval Velasco, Juan Esteban Rodríguez-Rodríguez, Miriam J Bravo-Lopez, Barbara Moguel, Rosa Irene Fregel Lorenzo, Ernesto Garfias-Morales, Jazeps Medina Tretmanis, David Alberto Velázquez-Ramírez, Alberto Herrera-Muñóz, Karla Sandoval, Maria A Nieves-Colón, Gabriela Zepeda García Moreno, Fernando A Villanea, Eugenia Fernández Villanueva Medina, Ramiro Aguayo-Haro, Cristina Valdiosera, Alexander G Ioannidis, Andrés Moreno-Estrada, Flora Jay, Emilia Huerta-Sánchez, J Víctor Moreno-Mayar, Federico Sánchez Quinto, María C Ávila Arcos
Demographic history and genetic structure in pre-Hispanic Central Mexico. Science (New York, N.Y.) 380 (6645) (2023)
Mashaal Sohail, María J Palma-Martínez, Amanda Y Chong, Consuelo D Quinto-Cortés, Carmina Barberena-Jonas, Santiago G Medina-Muñoz, Aaron Ragsdale, Guadalupe Delgado-Sánchez, Luis Pablo Cruz-Hervert, Leticia Ferreyra-Reyes, Elizabeth Ferreira-Guerrero, Norma Mongua-Rodríguez, Sergio Canizales-Quintero, Andrés Jimenez-Kaufmann, Hortensia Moreno-Macías, Carlos Alberto Aguilar-Salinas, Kathryn Auckland, Adrián Cortés, Víctor Acuña-Alonzo, Christopher R Gignoux, Genevieve L Wojcik, Alexander G Ioannidis, Selene L Fernández-Valverde, Adrian V S Hill, María Teresa Tusié-Luna, Alexander J Mentzer, John Novembre, Lourdes García-García, Andrés Moreno-Estrada
Mexican Biobank advances population and medical genomics of diverse ancestries. Nature (2023)
Marçal Comajoan Cara, Daniel Mas Montserrat, Alexander G Ioannidis
PopGenAdapt: Semi-Supervised Domain Adaptation for Genotype-to-Phenotype Prediction in Underrepresented Populations. bioRxiv : the preprint server for biology (2023)
David Bonet, May Levin, Daniel Mas Montserrat, Alexander G Ioannidis
Machine Learning Strategies for Improved Phenotype Prediction in Underrepresented Populations. bioRxiv : the preprint server for biology (2023)
Viridiana Villa-Islas, Alan Izarraras-Gomez, Maximilian Larena, Elizabeth Mejía Perez Campos, Marcela Sandoval Velasco, Juan Esteban Rodríguez-Rodríguez, Miriam J Bravo-Lopez, Barbara Moguel, Rosa Irene Fregel Lorenzo, Ernesto Garfias-Morales, Jazeps Medina Tretmanis, David Alberto Velázquez-Ramírez, Alberto Herrera-Muñóz, Karla Sandoval, Maria A Nieves-Colón, Gabriela Zepeda García Moreno, Fernando A Villanea, Eugenia Fernández Villanueva Medina, Ramiro Aguayo-Haro, Cristina Valdiosera, Alexander G Ioannidis, Andrés Moreno-Estrada, Flora Jay, Emilia Huerta-Sánchez, J Víctor Moreno-Mayar, Federico Sánchez Quinto, María C Ávila Arcos
Demographic history and genetic structure in pre-Hispanic Central Mexico. Science (New York, N.Y.) 380 (6645) (2023)
Yue-Chen Liu, Rosalind Hunter-Anderson, Olivia Cheronet, Joanne Eakin, Frank Camacho, Michael Pietrusewsky, Nadin Rohland, Alexander G Ioannidis, J Stephen Athens, Michele Toomay Douglas, Rona Michi Ikehara-Quebral, Rebecca Bernardos, Brendan J Culleton, Matthew Mah, Nicole Adamski, Nasreen Broomandkhoshbacht, Kimberly Callan, Ann Marie Lawson, Kirsten Mandl, Megan Michel, Jonas Oppenheimer, Kristin Stewardson, Fatma Zalzala, Kenneth Kidd, Judith Kidd, Theodore G Schurr, Kathryn Auckland, Adrian V S Hill, Alexander J Mentzer, Consuelo D Quinto-Cortés, Kathryn Robson, Douglas J Kennett, Nick Patterson, Carlos D Bustamante, Andrés Moreno-Estrada, Matthew J T Spriggs, Miguel Vilar, Mark Lipson, Ron Pinhasi, David Reich
Ancient DNA reveals five streams of migration into Micronesia and matrilocality in early Pacific seafarers. Science (New York, N.Y.) 377 (6601) (2022)
Genevieve L Wojcik, Jessica Murphy, Jacob L Edelson, Christopher R Gignoux, Alexander G Ioannidis, Alisa K Manning, Manuel A Rivas, Steven Buyske, Audrey E Hendricks
Opportunities and challenges for the use of common controls in sequencing studies. Nature reviews. Genetics 23 (11) (2022)
Juan Esteban Rodríguez-Rodríguez, Alexander G Ioannidis, Santiago G Medina-Muñoz, Carmina Barberena-Jonas, Javier Blanco-Portillo, Consuelo D Quinto-Cortés, Andrés Moreno-Estrada
The genetic legacy of the Manila galleon trade in Mexico. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 377 (1852) (2022)
Julia Gimbernat-Mayol, Albert Dominguez Mantes, Carlos D Bustamante, Daniel Mas Montserrat, Alexander G Ioannidis
Archetypal Analysis for population genetics. PLoS computational biology 18 (8) (2022)
Victoria N Parikh, Alexander G Ioannidis, David Jimenez-Morales, John E Gorzynski, Hannah N De Jong, Xiran Liu, Jonasel A Roque, Victoria P Cepeda-Espinoza, Kazutoyo Osoegawa, Chris Hughes, Shirley C Sutton, Nathan Youlton, Ruchi Joshi, David Amar, Yosuke Tanigawa, Douglas Russo, Justin Wong, Jessie T Lauzon, Jacob Edelson, Daniel Mas Montserrat, Yongchan Kwon, Simone Rubinacci, Olivier Delaneau, Lorenzo Cappello, Jaehee Kim, Massa J Shoura, Archana N Raja, Nathaniel Watson, Nathan Hammond, Elizabeth Spiteri, Kalyan C Mallempati, Gonzalo Montero-Martín, Jeffrey Christle, Jennifer Kim, Anna Kirillova, Kinya Seo, Yong Huang, Chunli Zhao, Sonia Moreno-Grau, Steven G Hershman, Karen P Dalton, Jimmy Zhen, Jack Kamm, Karan D Bhatt, Alina Isakova, Maurizio Morri, Thanmayi Ranganath, Catherine A Blish, Angela J Rogers, Kari Nadeau, Samuel Yang, Andra Blomkalns, Ruth O'Hara, Norma F Neff, Christopher DeBoever, Sandor Szalma, Matthew T Wheeler, Christian M Gates, Kyle Kai-How Farh, Gary P Schroth, Phillip G Febbo, Francis deSouza, Omar E Cornejo, Marcelo Fernandez-Vina, Amy Kistler, Julia A Palacios, Benjamin A Pinsky, Carlos D Bustamante, Manuel A Rivas, Euan A Ashley
Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy. Nature communications 13 (1) (2022)
Alexander G Ioannidis, Javier Blanco-Portillo, Karla Sandoval, Erika Hagelberg, Carmina Barberena-Jonas, Adrian V S Hill, Juan Esteban Rodríguez-Rodríguez, Keolu Fox, Kathryn Robson, Sonia Haoa-Cardinali, Consuelo D Quinto-Cortés, Juan Francisco Miquel-Poblete, Kathryn Auckland, Tom Parks, Abdul Salam M Sofro, María C Ávila-Arcos, Alexandra Sockell, Julian R Homburger, Celeste Eng, Scott Huntsman, Esteban G Burchard, Christopher R Gignoux, Ricardo A Verdugo, Mauricio Moraga, Carlos D Bustamante, Alexander J Mentzer, Andrés Moreno-Estrada
Paths and timings of the peopling of Polynesia inferred from genomic networks. Nature 597 (7877) (2021)
John E Gorzynski, Hannah N De Jong, David Amar, Chris R Hughes, Alexander G Ioannidis, Rob Bierman, Darren Liu, Yosuke Tanigawa, Amy L Kistler, Jack Kamm, Jaehee Kim, Lorenzo Cappello, Norma F Neff, Simone Rubinacci, Olivier Delaneau, Massa J Shoura, Kinya Seo, Anna Kirillova, Archana Natarajan Raja, Shirley C Sutton, ChunHong Huang, Malaya Kumar Sahoo, Kalyan C Mallempati, Gonzalo Montero-Martin, Kazutoyo Osoegawa, David Jimenez-Morales, Nathaniel Watson, Nathan Hammond, Ruchi Joshi, Marcelo Fernandez-Vina, Jeffrey W Christle, Matthew T Wheeler, Phil Febbo, Kyle Farh, Gary P Schroth, F Desouza, Julia Palacios, Julia Salzman, Benjamin A Pinsky, Manuel A Rivas, Carlos D Bustamante, Euan A Ashley, Victoria N Parikh
High-throughput SARS-CoV-2 and host genome sequencing from single nasopharyngeal swabs. medRxiv : the preprint server for health sciences (2020)