Alexander J Hartemink

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 27

Top Topics

Transcription Factor

Top Venues

Nature genetics

Genome research

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Kevin Moyung, Yulong Li, Alexander J Hartemink, David M MacAlpine
Genome-wide nucleosome and transcription factor responses to genetic perturbations reveal chromatin-mediated mechanisms of transcriptional regulation. bioRxiv : the preprint server for biology (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics (2024)
Kevin Moyung, Yulong Li, Alexander J Hartemink, David M MacAlpine
Genome-wide nucleosome and transcription factor responses to genetic perturbations reveal chromatin-mediated mechanisms of transcriptional regulation. bioRxiv : the preprint server for biology (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Author Correction: Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics (2024)
Kevin Moyung, Yulong Li, Alexander J Hartemink, David M MacAlpine
Genome-wide nucleosome and transcription factor responses to genetic perturbations reveal chromatin-mediated mechanisms of transcriptional regulation. bioRxiv : the preprint server for biology (2024)
Sneha Mitra, Rohan Malik, Wilfred Wong, Afsana Rahman, Alexander J Hartemink, Yuri Pritykin, Kushal K Dey, Christina S Leslie
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis. Nature genetics 56 (4) (2024)
Boning Chen, Heather K MacAlpine, Alexander J Hartemink, David M MacAlpine
Spatiotemporal kinetics of CAF-1-dependent chromatin maturation ensures transcription fidelity during S-phase. Genome research (2023)
Boning Chen, Heather K MacAlpine, Alexander J Hartemink, David M MacAlpine
Spatiotemporal kinetics of CAF-1-dependent chromatin maturation ensures transcription fidelity during S-phase. bioRxiv : the preprint server for biology (2023)
Kaixuan Luo, Jianling Zhong, Alexias Safi, Linda K Hong, Alok K Tewari, Lingyun Song, Timothy E Reddy, Li Ma, Gregory E Crawford, Alexander J Hartemink
Profiling the quantitative occupancy of myriad transcription factors across conditions by modeling chromatin accessibility data. Genome research 32 (6) (2022)
Trung Q Tran, Heather K MacAlpine, Vinay Tripuraneni, Sneha Mitra, David M MacAlpine, Alexander J Hartemink
Linking the dynamics of chromatin occupancy and transcription with predictive models. Genome research 31 (6) (2021)
Sneha Mitra, Jianling Zhong, Trung Q Tran, David M MacAlpine, Alexander J Hartemink
RoboCOP: jointly computing chromatin occupancy profiles for numerous factors from chromatin accessibility data. Nucleic acids research 49 (14) (2021)
Vinay Tripuraneni, Gonen Memisoglu, Heather K MacAlpine, Trung Q Tran, Wei Zhu, Alexander J Hartemink, James E Haber, David M MacAlpine
Local nucleosome dynamics and eviction following a double-strand break are reversible by NHEJ-mediated repair in the absence of DNA replication. Genome research 31 (5) (2021)
Yulong Li, Alexander J Hartemink, David M MacAlpine
Cell-Cycle-Dependent Chromatin Dynamics at Replication Origins. Genes 12 (12) (2021)