Amir Alavi

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 4

Top Topics

Gene Expression

Hematopoietic Stem Cell

Electronic Health Record

High Throughput

Top Venues

PLoS computational biology

Nature communications

bioRxiv : the preprint server for biology

Carnegie Mellon University

Carnegie Mellon University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Carnegie Mellon University

United States

Graduate Teaching Assistant :: Computational Biology Department

Apple Inc

United States

Software Engineering Intern :: WebKit Security and Compatibility

Microsoft Corp

United States

Software Engineering Intern :: Office, Data & Visualization

Intel Corp Hillsboro

United States

Software Engineering Intern :: Xeon Phi Software Engineering

Education History

Carnegie Mellon University

United States

PHD :: Computational Biology

Publications

Joshua Hislop, Amir Alavi, Qi Song, Rayna Schoenberger, Kamyar Keshavarz F, Ryan LeGraw, Jeremy Velazquez, Tahere Mokhtari, Mohammad Nasser Taheri, Matthew Rytel, Susana M Chuva de Sousa Lopes, Simon Watkins, Donna Stolz, Samira Kiani, Berna Sozen, Ziv Bar-Joseph, Mo R Ebrahimkhani
Modelling Human Post-Implantation Development via Extra-Embryonic Niche Engineering. bioRxiv : the preprint server for biology (2023)
Ann Zeleniak, Connor Wiegand, Wen Liu, Catherine McCormick, Ravikumar K, Amir Alavi, Haonan Guan, Suzanne Bertera, Robert Lakomy, Asako Tajima, Henry Cohen, Stephanie Wong, Lame Balikani, Benjamin Mizerak, Ziv Bar-Joseph, Massimo Trucco, Ipsita Banerjee, Yong Fan
De novo construction of T cell compartment in humanized mice engrafted with iPSC-derived thymus organoids. Nature methods 19 (10) (2022)
Amir Alavi, Ziv Bar-Joseph
Iterative point set registration for aligning scRNA-seq data. PLoS computational biology 16 (10) (2020)
Amir Alavi, Matthew Ruffalo, Aiyappa Parvangada, Zhilin Huang, Ziv Bar-Joseph
A web server for comparative analysis of single-cell RNA-seq data. Nature communications 9 (1) (2018)