Matthew Ruffalo

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 8

Top Topics

Electronic Health Record

Induced Pluripotent Stem Cells

Top Venues

bioRxiv : the preprint server for biology

BMC systems biology

PLoS computational biology

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Katy Börner, Philip D Blood, Jonathan C Silverstein, Matthew Ruffalo, Sarah A Teichmann, Gloria S Pryhuber, Ravi S Misra, Jeffrey M Purkerson, Jean Fan, John W Hickey, Gesmira Molla, Chuan Xu, Yun Zhang, Griffin M Weber, Yashvardhan Jain, Danial Qaurooni, Yongxin Kong, null null, Andreas Bueckle, Bruce W Herr
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage. bioRxiv : the preprint server for biology (2024)
Katy Börner, Philip D Blood, Jonathan C Silverstein, Matthew Ruffalo, Sarah A Teichmann, Gloria S Pryhuber, Ravi S Misra, Jeffrey M Purkerson, Jean Fan, John W Hickey, Gesmira Molla, Chuan Xu, Yun Zhang, Griffin M Weber, Yashvardhan Jain, Danial Qaurooni, Yongxin Kong, null null, Andreas Bueckle, Bruce W Herr
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage. bioRxiv : the preprint server for biology (2024)
Katy Börner, Philip D Blood, Jonathan C Silverstein, Matthew Ruffalo, Sarah A Teichmann, Gloria S Pryhuber, Ravi S Misra, Jeffrey M Purkerson, Jean Fan, John W Hickey, Gesmira Molla, Chuan Xu, Yun Zhang, Griffin M Weber, Yashvardhan Jain, Danial Qaurooni, Yongxin Kong, null null, Andreas Bueckle, Bruce W Herr
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage. bioRxiv : the preprint server for biology (2024)
Katy Börner, Philip D Blood, Jonathan C Silverstein, Matthew Ruffalo, Sarah A Teichmann, Gloria S Pryhuber, Ravi S Misra, Jeffrey M Purkerson, Jean Fan, John W Hickey, Gesmira Molla, Chuan Xu, Yun Zhang, Griffin M Weber, Yashvardhan Jain, Danial Qaurooni, Yongxin Kong, null null, Andreas Bueckle, Bruce W Herr
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage. bioRxiv : the preprint server for biology (2024)
Qi Song, Matthew Ruffalo, Ziv Bar-Joseph
Using single cell atlas data to reconstruct regulatory networks. Nucleic acids research (2023)
Matthew Ruffalo, Roby Thomas, Jian Chen, Adrian V Lee, Steffi Oesterreich, Ziv Bar-Joseph
Network-guided prediction of aromatase inhibitor response in breast cancer. PLoS computational biology 15 (2) (2019)
Amir Alavi, Matthew Ruffalo, Aiyappa Parvangada, Zhilin Huang, Ziv Bar-Joseph
A web server for comparative analysis of single-cell RNA-seq data. Nature communications 9 (1) (2018)
Matthew Ruffalo, Petar Stojanov, Venkata Krishna Pillutla, Rohan Varma, Ziv Bar-Joseph
Reconstructing cancer drug response networks using multitask learning. BMC systems biology 11 (1) (2017)