Andreas D Baxevanis

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 29

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Genome research

Genome biology and evolution

The EMBO journal

This page only lists publications with an associated author ORCID identifier.

Publications

Christine E Schnitzler, E Sally Chang, Justin Waletich, Gonzalo Quiroga-Artigas, Wai Yee Wong, Anh-Dao Nguyen, Sofia N Barreira, Liam B Doonan, Paul Gonzalez, Sergey Koren, James M Gahan, Steven M Sanders, Brian Bradshaw, Timothy Q DuBuc, Febrimarsa Febrimarsa, Danielle de Jong, Eric P Nawrocki, Alexandra Larson, Samantha Klasfeld, Sebastian G Gornik, R Travis Moreland, Tyra G Wolfsberg, Adam M Phillippy, James C Mullikin, Oleg Simakov, Paulyn Cartwright, Matthew L Nicotra, Uri Frank, Andreas D Baxevanis
The genome of the colonial hydroid Hydractinia reveals that their stem cells use a toolkit of evolutionarily shared genes with all animals. Genome research 34 (3) (2024)
Paul Gonzalez, Quinn C Hauck, Andreas D Baxevanis
Conserved non-coding elements evolve around the same genes throughout Metazoan evolution. Genome biology and evolution (2024)
Paul Gonzalez, Quinn C Hauck, Andreas D Baxevanis
Conserved Noncoding Elements Evolve Around the Same Genes Throughout Metazoan Evolution. Genome biology and evolution 16 (4) (2024)
Christine E Schnitzler, E Sally Chang, Justin Waletich, Gonzalo Quiroga-Artigas, Wai Yee Wong, Anh-Dao Nguyen, Sofia N Barreira, Liam B Doonan, Paul Gonzalez, Sergey Koren, James M Gahan, Steven M Sanders, Brian Bradshaw, Timothy Q DuBuc, Febrimarsa Febrimarsa, Danielle de Jong, Eric P Nawrocki, Alexandra Larson, Samantha Klasfeld, Sebastian G Gornik, R Travis Moreland, Tyra G Wolfsberg, Adam M Phillippy, James C Mullikin, Oleg Simakov, Paulyn Cartwright, Matthew L Nicotra, Uri Frank, Andreas D Baxevanis
The genome of the colonial hydroid Hydractinia reveals that their stem cells use a toolkit of evolutionarily shared genes with all animals. Genome research (2024)
Paul Gonzalez, Quinn C Hauck, Andreas D Baxevanis
Conserved Noncoding Elements Evolve Around the Same Genes Throughout Metazoan Evolution. Genome biology and evolution 16 (4) (2024)
R Travis Moreland, Suiyuan Zhang, Sofia N Barreira, Joseph F Ryan, Andreas D Baxevanis
An AI-generated proteome-scale dataset of predicted protein structures for the ctenophore Mnemiopsis leidyi. Proteomics 24 (15) (2024)
R Travis Moreland, Suiyuan Zhang, Sofia N Barreira, Joseph F Ryan, Andreas D Baxevanis
An AI-generated proteome-scale dataset of predicted protein structures for the ctenophore Mnemiopsis leidyi. Proteomics 24 (15) (2024)
Christine E Schnitzler, E Sally Chang, Justin Waletich, Gonzalo Quiroga-Artigas, Wai Yee Wong, Anh-Dao Nguyen, Sofia N Barreira, Liam B Doonan, Paul Gonzalez, Sergey Koren, James M Gahan, Steven M Sanders, Brian Bradshaw, Timothy Q DuBuc, Febrimarsa Febrimarsa, Danielle de Jong, Eric P Nawrocki, Alexandra Larson, Samantha Klasfeld, Sebastian G Gornik, R Travis Moreland, Tyra G Wolfsberg, Adam M Phillippy, James C Mullikin, Oleg Simakov, Paulyn Cartwright, Matthew L Nicotra, Uri Frank, Andreas D Baxevanis
The genome of the colonial hydroid Hydractinia reveals that their stem cells use a toolkit of evolutionarily shared genes with all animals. Genome research 34 (3) (2024)
Christine E Schnitzler, E Sally Chang, Justin Waletich, Gonzalo Quiroga-Artigas, Wai Yee Wong, Anh-Dao Nguyen, Sofia Barreira, Liam B Doonan, Paul Gonzalez, Sergey Koren, James Gahan, Steven M Sanders, Brian Bradshaw, Timothy Q DuBuc, Febrimarsa Febrimarsa, Danielle de Jong, Eric Nawrocki, Alexandra Larson, Samantha Klasfeld, Sebastian G Gornik, R Travis Moreland, Tyra G Wolfsberg, Adam M Phillippy, James Mullikin, Oleg Simakov, Paulyn Cartwright, Matthew L Nicotra, Uri Frank, Andreas D Baxevanis
The genome of the colonial hydroid Hydractinia reveals their stem cells utilize a toolkit of evolutionarily shared genes with all animals. Genome research (2024)
R Travis Moreland, Suiyuan Zhang, Sofia N Barreira, Joseph F Ryan, Andreas D Baxevanis
An AI-generated proteome-scale dataset of predicted protein structures for the ctenophore Mnemiopsis leidyi. Proteomics (2024)
Christine E Schnitzler, E Sally Chang, Justin Waletich, Gonzalo Quiroga-Artigas, Wai Yee Wong, Anh-Dao Nguyen, Sofia N Barreira, Liam B Doonan, Paul Gonzalez, Sergey Koren, James M Gahan, Steven M Sanders, Brian Bradshaw, Timothy Q DuBuc, Febrimarsa Febrimarsa, Danielle de Jong, Eric P Nawrocki, Alexandra Larson, Samantha Klasfeld, Sebastian G Gornik, R Travis Moreland, Tyra G Wolfsberg, Adam M Phillippy, James C Mullikin, Oleg Simakov, Paulyn Cartwright, Matthew L Nicotra, Uri Frank, Andreas D Baxevanis
The genome of the colonial hydroid Hydractinia reveals that their stem cells use a toolkit of evolutionarily shared genes with all animals. Genome research 34 (3) (2024)
Christine E Schnitzler, E Sally Chang, Justin Waletich, Gonzalo Quiroga-Artigas, Wai Yee Wong, Anh-Dao Nguyen, Sofia N Barreira, Liam B Doonan, Paul Gonzalez, Sergey Koren, James M Gahan, Steven M Sanders, Brian Bradshaw, Timothy Q DuBuc, Febrimarsa Febrimarsa, Danielle de Jong, Eric P Nawrocki, Alexandra Larson, Samantha Klasfeld, Sebastian G Gornik, R Travis Moreland, Tyra G Wolfsberg, Adam M Phillippy, James C Mullikin, Oleg Simakov, Paulyn Cartwright, Matthew L Nicotra, Uri Frank, Andreas D Baxevanis
The genome of the colonial hydroid Hydractinia reveals that their stem cells use a toolkit of evolutionarily shared genes with all animals. Genome research 34 (3) (2024)
Christine E Schnitzler, E Sally Chang, Justin Waletich, Gonzalo Quiroga-Artigas, Wai Yee Wong, Anh-Dao Nguyen, Sofia N Barreira, Liam B Doonan, Paul Gonzalez, Sergey Koren, James M Gahan, Steven M Sanders, Brian Bradshaw, Timothy Q DuBuc, Febrimarsa Febrimarsa, Danielle de Jong, Eric P Nawrocki, Alexandra Larson, Samantha Klasfeld, Sebastian G Gornik, R Travis Moreland, Tyra G Wolfsberg, Adam M Phillippy, James C Mullikin, Oleg Simakov, Paulyn Cartwright, Matthew L Nicotra, Uri Frank, Andreas D Baxevanis
The genome of the colonial hydroid Hydractinia reveals that their stem cells use a toolkit of evolutionarily shared genes with all animals. Genome research 34 (3) (2024)
R Travis Moreland, Suiyuan Zhang, Sofia N Barreira, Joseph F Ryan, Andreas D Baxevanis
An AI-generated proteome-scale dataset of predicted protein structures for the ctenophore Mnemiopsis leidyi. Proteomics 24 (15) (2024)
Paul Gonzalez, Quinn C Hauck, Andreas D Baxevanis
Conserved Noncoding Elements Evolve Around the Same Genes Throughout Metazoan Evolution. Genome biology and evolution 16 (4) (2024)
Christine E Schnitzler, E Sally Chang, Justin Waletich, Gonzalo Quiroga-Artigas, Wai Yee Wong, Anh-Dao Nguyen, Sofia Barreira, Liam B Doonan, Paul Gonzalez, Sergey Koren, James Gahan, Steven M Sanders, Brian Bradshaw, Timothy Q DuBuc, Febrimarsa Febrimarsa, Danielle de Jong, Eric Nawrocki, Alexandra Larson, Samantha Klasfeld, Sebastian G Gornik, R Travis Moreland, Tyra G Wolfsberg, Adam M Phillippy, James Mullikin, Oleg Simakov, Paulyn Cartwright, Matthew L Nicotra, Uri Frank, Andreas D Baxevanis
The genome of the colonial hydroid Hydractinia reveals their stem cells utilize a toolkit of evolutionarily shared genes with all animals. Genome research (2024)
Jack F Cazet, Stefan Siebert, Hannah Morris Little, Philip Bertemes, Abby S Primack, Peter Ladurner, Matthias Achrainer, Mark T Fredriksen, R Travis Moreland, Sumeeta Singh, Suiyuan Zhang, Tyra G Wolfsberg, Christine E Schnitzler, Andreas D Baxevanis, Oleg Simakov, Bert Hobmayer, Celina E Juliano
A chromosome-scale epigenetic map of the Hydra genome reveals conserved regulators of cell state. Genome research 33 (2) (2023)
Jack F Cazet, Stefan Siebert, Hannah Morris Little, Philip Bertemes, Abby S Primack, Peter Ladurner, Matthias Achrainer, Mark T Fredriksen, R Travis Moreland, Sumeeta Singh, Suiyuan Zhang, Tyra G Wolfsberg, Christine E Schnitzler, Andreas D Baxevanis, Oleg Simakov, Bert Hobmayer, Celina E Juliano
A chromosome-scale epigenetic map of the Hydra genome reveals conserved regulators of cell state. Genome research 33 (2) (2023)
Christine E Schnitzler, E Sally Chang, Justin Waletich, Gonzalo Quiroga-Artigas, Wai Yee Wong, Anh-Dao Nguyen, Sofia N Barreira, Liam B Doonan, Paul Gonzalez, Sergey Koren, James M Gahan, Steven M Sanders, Brian Bradshaw, Timothy Q DuBuc, Febrimarsa Febrimarsa, Danielle de Jong, Eric P Nawrocki, Alexandra Larson, Samantha Klasfeld, Sebastian G Gornik, R Travis Moreland, Tyra G Wolfsberg, Adam M Phillippy, James C Mullikin, Oleg Simakov, Paulyn Cartwright, Matthew L Nicotra, Uri Frank, Andreas D Baxevanis
The genome of the colonial hydroid Hydractinia reveals their stem cells utilize a toolkit of evolutionarily shared genes with all animals. bioRxiv : the preprint server for biology (2023)
Jack F Cazet, Stefan Siebert, Hannah Morris Little, Philip Bertemes, Abby S Primack, Peter Ladurner, Matthias Achrainer, Mark T Fredriksen, R Travis Moreland, Sumeeta Singh, Suiyuan Zhang, Tyra G Wolfsberg, Christine E Schnitzler, Andreas D Baxevanis, Oleg Simakov, Bert Hobmayer, Celina E Juliano
A chromosome-scale epigenetic map of the Hydra genome reveals conserved regulators of cell state. Genome research 33 (2) (2023)
Febrimarsa Febrimarsa, Sebastian G Gornik, Sofia N Barreira, Miguel Salinas-Saavedra, Christine E Schnitzler, Andreas D Baxevanis, Uri Frank
Randomly incorporated genomic N6-methyldeoxyadenosine delays zygotic transcription initiation in a cnidarian. The EMBO journal 42 (15) (2023)
Jack F Cazet, Stefan Siebert, Hannah Morris Little, Philip Bertemes, Abby S Primack, Peter Ladurner, Matthias Achrainer, Mark T Fredriksen, R Travis Moreland, Sumeeta Singh, Suiyuan Zhang, Tyra G Wolfsberg, Christine E Schnitzler, Andreas D Baxevanis, Oleg Simakov, Bert Hobmayer, Celina E Juliano
A chromosome-scale epigenetic map of the Hydra genome reveals conserved regulators of cell state. Genome research 33 (2) (2023)
Jack F Cazet, Stefan Siebert, Hannah Morris Little, Philip Bertemes, Abby S Primack, Peter Ladurner, Matthias Achrainer, Mark T Fredriksen, R Travis Moreland, Sumeeta Singh, Suiyuan Zhang, Tyra G Wolfsberg, Christine E Schnitzler, Andreas D Baxevanis, Oleg Simakov, Bert Hobmayer, Celina E Juliano
A chromosome-scale epigenetic map of the Hydra genome reveals conserved regulators of cell state. Genome research (2023)
Jack F Cazet, Stefan Siebert, Hannah Morris Little, Philip Bertemes, Abby S Primack, Peter Ladurner, Matthias Achrainer, Mark T Fredriksen, R Travis Moreland, Sumeeta Singh, Suiyuan Zhang, Tyra G Wolfsberg, Christine E Schnitzler, Andreas D Baxevanis, Oleg Simakov, Bert Hobmayer, Celina E Juliano
A chromosome-scale epigenetic map of the Hydra genome reveals conserved regulators of cell state. Genome research (2023)
Aidan L Huene, Steven M Sanders, Zhiwei Ma, Anh-Dao Nguyen, Sergey Koren, Manuel H Michaca, May Christine V Malicdan, Adam M Phillippy, Christine E Schnitzler, Andreas D Baxevanis, Matthew L Nicotra
A family of unusual immunoglobulin superfamily genes in an invertebrate histocompatibility complex. Proceedings of the National Academy of Sciences of the United States of America 119 (40) (2022)
Sofia N Barreira, Anh-Dao Nguyen, Mark T Fredriksen, Tyra G Wolfsberg, R Travis Moreland, Andreas D Baxevanis
AniProtDB: A Collection of Consistently Generated Metazoan Proteomes for Comparative Genomics Studies. Molecular biology and evolution 38 (10) (2022)
Gustavo Sudre, Derek E Gildea, Gauri G Shastri, Wendy Sharp, Benjamin Jung, Qing Xu, Pavan K Auluck, Laura Elnitski, Andreas D Baxevanis, Stefano Marenco, Philip Shaw
Mapping the cortico-striatal transcriptome in attention deficit hyperactivity disorder. Molecular psychiatry (2022)
Eleni Chrysostomou, Hakima Flici, Sebastian G Gornik, Miguel Salinas-Saavedra, James M Gahan, Emma T McMahon, Kerry Thompson, Shirley Hanley, Michelle Kincoyne, Christine E Schnitzler, Paul Gonzalez, Andreas D Baxevanis, Uri Frank
A cellular and molecular analysis of SoxB-driven neurogenesis in a cnidarian. eLife 11 (2022)
Timothy Q DuBuc, Christine E Schnitzler, Eleni Chrysostomou, Emma T McMahon, null Febrimarsa, James M Gahan, Tara Buggie, Sebastian G Gornik, Shirley Hanley, Sofia N Barreira, Paul Gonzalez, Andreas D Baxevanis, Uri Frank
Transcription factor AP2 controls cnidarian germ cell induction. Science (New York, N.Y.) 367 (6479) (2020)