Ashty S Karim

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 17

Top Topics

Escherichia Coli

Circulating Tumor

Top Venues

Nature communications

bioRxiv : the preprint server for biology

ACS synthetic biology

Nature chemical biology

This page only lists publications with an associated author ORCID identifier.

Publications

Ashty S Karim, Dylan M Brown, Chloé M Archuleta, Sharisse Grannan, Ludmilla Aristilde, Yogesh Goyal, Joshua N Leonard, Niall M Mangan, Arthur Prindle, Gabriel J Rocklin, Keith E J Tyo, Laurie Zoloth, Michael C Jewett, Susanna Calkins, Neha P Kamat, Danielle Tullman-Ercek, Julius B Lucks
Deconstructing synthetic biology across scales: a conceptual approach for training synthetic biologists. Nature communications 15 (1) (2024)
Ashty S Karim, Dylan M Brown, Chloé M Archuleta, Sharisse Grannan, Ludmilla Aristilde, Yogesh Goyal, Joshua N Leonard, Niall M Mangan, Arthur Prindle, Gabriel J Rocklin, Keith E J Tyo, Laurie Zoloth, Michael C Jewett, Susanna Calkins, Neha P Kamat, Danielle Tullman-Ercek, Julius B Lucks
Deconstructing synthetic biology across scales: a conceptual approach for training synthetic biologists. Nature communications 15 (1) (2024)
Ashty S Karim, Dylan M Brown, Chloé M Archuleta, Sharisse Grannan, Ludmilla Aristilde, Yogesh Goyal, Joshua N Leonard, Niall M Mangan, Arthur Prindle, Gabriel J Rocklin, Keith E J Tyo, Laurie Zoloth, Michael C Jewett, Susanna Calkins, Neha P Kamat, Danielle Tullman-Ercek, Julius B Lucks
Deconstructing synthetic biology across scales: a conceptual approach for training synthetic biologists. Nature communications 15 (1) (2024)
Holly M Ekas, Brenda Wang, Adam D Silverman, Julius B Lucks, Ashty S Karim, Michael C Jewett
Engineering a PbrR-Based Biosensor for Cell-Free Detection of Lead at the Legal Limit. ACS synthetic biology (2024)
Jaeyoung Kirsten Jung, Blake J Rasor, Grant A Rybnicky, Adam D Silverman, Janet Standeven, Robert Kuhn, Teresa Granito, Holly M Ekas, Brenda M Wang, Ashty S Karim, Julius B Lucks, Michael C Jewett
At-home, cell-free synthetic biology education modules for transcriptional regulation and environmental water quality monitoring. bioRxiv : the preprint server for biology (2023)
Jaeyoung Kirsten Jung, Blake J Rasor, Grant A Rybnicky, Adam D Silverman, Janet Standeven, Robert Kuhn, Teresa Granito, Holly M Ekas, Brenda M Wang, Ashty S Karim, Julius B Lucks, Michael C Jewett
At-home, cell-free synthetic biology education modules for transcriptional regulation and environmental water quality monitoring. bioRxiv : the preprint server for biology (2023)
Andrew C Hunt, Bastian Vögeli, Ahmed O Hassan, Laura Guerrero, Weston Kightlinger, Danielle J Yoesep, Antje Krüger, Madison A DeWinter, Michael S. Diamond, Ashty S Karim, Michael C Jewett
A rapid cell-free expression and screening platform for antibody discovery. Nature communications 14 (1) (2023)
Jaeyoung Kirsten Jung, Blake J Rasor, Grant A Rybnicky, Adam D Silverman, Janet Standeven, Robert Kuhn, Teresa Granito, Holly M Ekas, Brenda M Wang, Ashty S Karim, Julius B Lucks, Michael C Jewett
At-home, cell-free synthetic biology education modules for transcriptional regulation and environmental water quality monitoring. bioRxiv : the preprint server for biology (2023)
Grant A Rybnicky, Nicholas A Fackler, Ashty S Karim, Michael Koepke, Michael C Jewett
Spacer2PAM: A computational framework to guide experimental determination of functional CRISPR-Cas system PAM sequences. Nucleic acids research 50 (6) (2022)
Fungmin Eric Liew, Robert Nogle, Tanus Abdalla, Blake J Rasor, Christina Canter, Rasmus O Jensen, Lan Wang, Jonathan Strutz, Payal Chirania, Sashini De Tissera, Alexander P Mueller, Zhenhua Ruan, Allan Gao, Loan Tran, Nancy L Engle, Jason C Bromley, James Daniell, Robert Conrado, Timothy J Tschaplinski, Richard J Giannone, Robert L Hettich, Ashty S Karim, Séan D Simpson, Steven D Brown, Ching Leang, Michael C Jewett, Michael Koepke
Carbon-negative production of acetone and isopropanol by gas fermentation at industrial pilot scale. Nature biotechnology 40 (3) (2022)
Bastian Vögeli, Luca Schulz, Shivani Garg, Katia Tarasava, James M Clomburg, Seung Hwan Lee, Aislinn Gonnot, Elamar Hakim Moully, Blaise R Kimmel, Loan Tran, Hunter Zeleznik, Steven D Brown, Sean D Simpson, Milan Mrksich, Ashty S Karim, Ramon Gonzalez, Michael Koepke, Michael C Jewett
Cell-free prototyping enables implementation of optimized reverse β-oxidation pathways in heterotrophic and autotrophic bacteria. Nature communications 13 (1) (2022)
Jessica G Perez, Erik D Carlson, Oliver Weisser, Camila Kofman, Kosuke Seki, Benjamin J Des Soye, Ashty S Karim, Michael C Jewett
Improving genomically recoded Escherichia coli to produce proteins containing non-canonical amino acids. Biotechnology journal (2021)
Ashty S Karim, Quentin M Dudley, Alex Juminaga, Yongbo Yuan, Samantha A Crowe, Jacob T Heggestad, Shivani Garg, Tanus Abdalla, William S Grubbe, Blake J Rasor, David N Coar, Maria Torculas, Michael Krein, FungMin Eric Liew, Amy Quattlebaum, Rasmus O Jensen, Jeffrey A Stuart, Sean D Simpson, Michael Koepke, Michael C Jewett
In vitro prototyping and rapid optimization of biosynthetic enzymes for cell design. Nature chemical biology 16 (8) (2020)
Ashty S Karim, Fungmin Eric Liew, Shivani Garg, Bastian Vögeli, Blake J Rasor, Aislinn Gonnot, Marilene Pavan, Alex Juminaga, Séan D Simpson, Michael Köpke, Michael C Jewett
Modular cell-free expression plasmids to accelerate biological design in cells. Synthetic biology (Oxford, England) 5 (1) (2020)
Jonathan W Bogart, Maria D Cabezas, Bastian Vögeli, Derek A Wong, Ashty S Karim, Michael C Jewett
Cell-Free Exploration of the Natural Product Chemical Space. Chembiochem : a European journal of chemical biology 22 (1) (2020)
Adam D Silverman, Ashty S Karim, Michael C Jewett
Cell-free gene expression: an expanded repertoire of applications. Nature reviews. Genetics 21 (3) (2019)
Filippo Caschera, Ashty S Karim, Gianluca Gazzola, Anne E d'Aquino, Norman H Packard, Michael C Jewett
High-Throughput Optimization Cycle of a Cell-Free Ribosome Assembly and Protein Synthesis System. ACS synthetic biology 7 (12) (2018)