Ben Berkhout

ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 9

Top Venues

Cell & bioscience

PloS one

Virus evolution

Computational and mathematical methods in medicine

This page only lists publications with an associated author ORCID identifier.

Publications

Lise Sarah Namer, Alex Harwig, Stephan P Heynen, Atze T Das, Ben Berkhout, Raymond Kaempfer
HIV co-opts a cellular antiviral mechanism, activation of stress kinase PKR by its RNA, to enable splicing of rev/tat mRNA. Cell & bioscience 13 (1) (2023)
Lise Sarah Namer, Alex Harwig, Stephan P Heynen, Atze T Das, Ben Berkhout, Raymond Kaempfer
HIV co-opts a cellular antiviral mechanism, activation of stress kinase PKR by its RNA, to enable splicing of rev/tat mRNA. Cell & bioscience 13 (1) (2023)
Lise Sarah Namer, Alex Harwig, Stephan P Heynen, Atze T Das, Ben Berkhout, Raymond Kaempfer
HIV co-opts a cellular antiviral mechanism, activation of stress kinase PKR by its RNA, to enable splicing of rev/tat mRNA. Cell & bioscience 13 (1) (2023)
Lele Zhao, Chris Wymant, François Blanquart, Tanya Golubchik, Astrid Gall, Margreet Bakker, Daniela Bezemer, Matthew Hall, Swee Hoe Ong, Jan Albert, Norbert Bannert, Jacques Fellay, M Kate Grabowski, Barbara Gunsenheimer-Bartmeyer, Huldrych F Günthard, Pia Kivelä, Roger D Kouyos, Oliver Laeyendecker, Laurence Meyer, Kholoud Porter, Ard van Sighem, Marc van der Valk, Ben Berkhout, Paul Kellam, Marion Cornelissen, Peter Reiss, Christophe Fraser, Luca Ferretti
Phylogenetic estimation of the viral fitness landscape of HIV-1 set-point viral load. Virus evolution 8 (1) (2022)
Caroline S Binda, Bep Klaver, Ben Berkhout, Atze T Das
CRISPR-Cas9 Dual-gRNA Attack Causes Mutation, Excision and Inversion of the HIV-1 Proviral DNA. Viruses 12 (3) (2020)
Formijn J van Hemert, Maarten Jebbink, Andries van der Ark, Frits Scholer, Ben Berkhout
Euclidean Distance Analysis Enables Nucleotide Skew Analysis in Viral Genomes. Computational and mathematical methods in medicine 2018 (2018)
Chris Wymant, François Blanquart, Tanya Golubchik, Astrid Gall, Margreet Bakker, Daniela Bezemer, Nicholas J Croucher, Matthew Hall, Mariska Hillebregt, Swee Hoe Ong, Oliver Ratmann, Jan Albert, Norbert Bannert, Jacques Fellay, Katrien Fransen, Annabelle Gourlay, M Kate Grabowski, Barbara Gunsenheimer-Bartmeyer, Huldrych F Günthard, Pia Kivelä, Roger Kouyos, Oliver Laeyendecker, Kirsi Liitsola, Laurence Meyer, Kholoud Porter, Matti Ristola, Ard van Sighem, Ben Berkhout, Marion Cornelissen, Paul Kellam, Peter Reiss, Christophe Fraser, null null
Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver. Virus evolution 4 (1) (2018)
Alex Harwig, Zita Kruize, Zhenhuang Yang, Tobias Restle, Ben Berkhout
Analysis of AgoshRNA maturation and loading into Ago2. PloS one 12 (8) (2017)
Elena Herrera-Carrillo, Ben Berkhout
Novel AgoshRNA molecules for silencing of the CCR5 co-receptor for HIV-1 infection. PloS one 12 (5) (2017)

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Publication Activity (10 Years)

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Ben Berkhout