Calvin Yu-Chian Chen

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 31

Top Topics

Artificial Intelligence

Top Venues

The journal of physical chemistry letters

Nature communications

Signal transduction and targeted therapy

Chemical science

This page only lists publications with an associated author ORCID identifier.

Publications

Ziduo Yang, Yi-Ming Zhao, Xian Wang, Xiaoqing Liu, Xiuying Zhang, Yifan Li, Qiujie Lv, Calvin Yu-Chian Chen, Lei Shen
Scalable crystal structure relaxation using an iteration-free deep generative model with uncertainty quantification. Nature communications 15 (1) (2024)
Haohuai He, Bing He, Lei Guan, Yu Zhao, Feng Jiang, Guanxing Chen, Qingge Zhu, Calvin Yu-Chian Chen, Ting Li, Jianhua Yao
De novo generation of SARS-CoV-2 antibody CDRH3 with a pre-trained generative large language model. Nature communications 15 (1) (2024)
Yifu Chen, Guanxing Chen, Calvin Yu-Chian Chen
PSSP-MFFNet: A Multifeature Fusion Network for Protein Secondary Structure Prediction. ACS omega 9 (5) (2024)
Guanxing Chen, Haohuai He, Qiujie Lv, Lu Zhao, Calvin Yu-Chian Chen
MMFA-DTA: Multimodal Feature Attention Fusion Network for Drug-Target Affinity Prediction for Drug Repurposing Against SARS-CoV-2. Journal of chemical theory and computation (2024)
Haohuai He, Bing He, Lei Guan, Yu Zhao, Feng Jiang, Guanxing Chen, Qingge Zhu, Calvin Yu-Chian Chen, Ting Li, Jianhua Yao
De novo generation of SARS-CoV-2 antibody CDRH3 with a pre-trained generative large language model. Nature communications 15 (1) (2024)
Haohuai He, Bing He, Lei Guan, Yu Zhao, Feng Jiang, Guanxing Chen, Qingge Zhu, Calvin Yu-Chian Chen, Ting Li, Jianhua Yao
De novo generation of SARS-CoV-2 antibody CDRH3 with a pre-trained generative large language model. Nature communications 15 (1) (2024)
Qiujie Lv, Guanxing Chen, Haohuai He, Ziduo Yang, Lu Zhao, Kang Zhang, Calvin Yu-Chian Chen
TCMBank-the largest TCM database provides deep learning-based Chinese-Western medicine exclusion prediction. Signal transduction and targeted therapy 8 (1) (2023)
Tiejun Dong, Ziduo Yang, Jun Zhou, Calvin Yu-Chian Chen
Equivariant Flexible Modeling of the Protein-Ligand Binding Pose with Geometric Deep Learning. Journal of chemical theory and computation (2023)
Ziduo Yang, Weihe Zhong, Qiujie Lv, Tiejun Dong, Calvin Yu-Chian Chen
Geometric Interaction Graph Neural Network for Predicting Protein-Ligand Binding Affinities from 3D Structures (GIGN). The journal of physical chemistry letters 14 (8) (2023)
Ziduo Yang, Weihe Zhong, Qiujie Lv, Tiejun Dong, Calvin Yu-Chian Chen
Geometric Interaction Graph Neural Network for Predicting Protein-Ligand Binding Affinities from 3D Structures (GIGN). The journal of physical chemistry letters (2023)
Qiujie Lv, Guanxing Chen, Haohuai He, Ziduo Yang, Lu Zhao, Hsin-Yi Chen, Calvin Yu-Chian Chen
TCMBank: bridges between the largest herbal medicines, chemical ingredients, target proteins, and associated diseases with intelligence text mining. Chemical science 14 (39) (2023)
Ziduo Yang, Weihe Zhong, Qiujie Lv, Tiejun Dong, Calvin Yu-Chian Chen
Geometric Interaction Graph Neural Network for Predicting Protein-Ligand Binding Affinities from 3D Structures (GIGN). The journal of physical chemistry letters 14 (8) (2023)
Qiujie Lv, Guanxing Chen, Haohuai He, Ziduo Yang, Lu Zhao, Kang Zhang, Calvin Yu-Chian Chen
TCMBank-the largest TCM database provides deep learning-based Chinese-Western medicine exclusion prediction. Signal transduction and targeted therapy 8 (1) (2023)
Qiujie Lv, Guanxing Chen, Haohuai He, Ziduo Yang, Lu Zhao, Kang Zhang, Calvin Yu-Chian Chen
TCMBank-the largest TCM database provides deep learning-based Chinese-Western medicine exclusion prediction. Signal transduction and targeted therapy 8 (1) (2023)
Qiujie Lv, Guanxing Chen, Haohuai He, Ziduo Yang, Lu Zhao, Kang Zhang, Calvin Yu-Chian Chen
TCMBank-the largest TCM database provides deep learning-based Chinese-Western medicine exclusion prediction. Signal transduction and targeted therapy 8 (1) (2023)
Jingwen Huang, Guanxing Chen, Haiqing Liu, Wei Jiang, Siyao Mai, Lingli Zhang, Hong Zeng, Shaoxu Wu, Calvin Yu-Chian Chen, Zhuo Wu
MRI-based automated machine learning model for preoperative identification of variant histology in muscle-invasive bladder carcinoma. European radiology (2023)
Weihe Zhong, Ziduo Yang, Calvin Yu-Chian Chen
Retrosynthesis prediction using an end-to-end graph generative architecture for molecular graph editing. Nature communications 14 (1) (2023)
Ziduo Yang, Weihe Zhong, Qiujie Lv, Calvin Yu-Chian Chen
Learning size-adaptive molecular substructures for explainable drug-drug interaction prediction by substructure-aware graph neural network. Chemical science 13 (29) (2022)
Ziduo Yang, Weihe Zhong, Qiujie Lv, Calvin Yu-Chian Chen
Multitask deep learning with dynamic task balancing for quantum mechanical properties prediction. Physical chemistry chemical physics : PCCP 24 (9) (2022)
Ziduo Yang, Weihe Zhong, Lu Zhao, Calvin Yu-Chian Chen
MGraphDTA: deep multiscale graph neural network for explainable drug-target binding affinity prediction. Chemical science 13 (3) (2022)
Zi-Qiang Tang, Lu Zhao, Guan-Xing Chen, Calvin Yu-Chian Chen
Novel and versatile artificial intelligence algorithms for investigating possible GHSR1α and DRD1 agonists for Alzheimer's disease. RSC advances 11 (12) (2021)
Ziduo Yang, Weihe Zhong, Lu Zhao, Calvin Yu-Chian Chen
ML-DTI: Mutual Learning Mechanism for Interpretable Drug-Target Interaction Prediction. The journal of physical chemistry letters 12 (17) (2021)
Jia-Ning Gong, Lu Zhao, Guanxing Chen, Xu Chen, Zhi-Dong Chen, Calvin Yu-Chian Chen
A novel artificial intelligence protocol to investigate potential leads for diabetes mellitus. Molecular diversity 25 (3) (2021)
Hong-Yi Zhi, Lu Zhao, Cheng-Chun Lee, Calvin Yu-Chian Chen
A Novel Graph Neural Network Methodology to Investigate Dihydroorotate Dehydrogenase Inhibitors in Small Cell Lung Cancer. Biomolecules 11 (3) (2021)
Wei Chen, Guanxing Chen, Lu Zhao, Calvin Yu-Chian Chen
Predicting Drug-Target Interactions with Deep-Embedding Learning of Graphs and Sequences. The journal of physical chemistry. A 125 (25) (2021)
Zhi-Dong Chen, Lu Zhao, Hsin-Yi Chen, Jia-Ning Gong, Xu Chen, Calvin Yu-Chian Chen
A novel artificial intelligence protocol to investigate potential leads for Parkinson's disease. RSC advances 10 (39) (2020)
Xu Chen, Hsin-Yi Chen, Zhi-Dong Chen, Jia-Ning Gong, Calvin Yu-Chian Chen
A novel artificial intelligence protocol for finding potential inhibitors of acute myeloid leukemia. Journal of materials chemistry. B 8 (10) (2020)
Jian-Qiang Chen, Hsin-Yi Chen, Wen-Jie Dai, Qiu-Jie Lv, Calvin Yu-Chian Chen
Artificial Intelligence Approach to Find Lead Compounds for Treating Tumors. The journal of physical chemistry letters 10 (15) (2019)
Jun-Yan Li, Hsin-Yi Chen, Wen-Jie Dai, Qiu-Jie Lv, Calvin Yu-Chian Chen
Artificial Intelligence Approach To Investigate the Longevity Drug. The journal of physical chemistry letters 10 (17) (2019)
Hsin-Yi Chen, Jian-Qiang Chen, Jun-Yan Li, Hung-Jin Huang, Xi Chen, Hao-Ying Zhang, Calvin Yu-Chian Chen
Deep Learning and Random Forest Approach for Finding the Optimal Traditional Chinese Medicine Formula for Treatment of Alzheimer's Disease. Journal of chemical information and modeling 59 (4) (2019)
Wenjie Dai, Hsin-Yi Chen, Calvin Yu-Chian Chen
A Network Pharmacology-Based Approach to Investigate the Novel TCM Formula against Huntington's Disease and Validated by Support Vector Machine Model. Evidence-based complementary and alternative medicine : eCAM 2018 (2018)