Carlo Colantuoni

ORCID

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 12

Top Venues

bioRxiv : the preprint server for biology

Biostatistics (Oxford, England)

Science advances

PLoS computational biology

This page only lists publications with an associated author ORCID identifier.

Publications

Shreyash Sonthalia, Guangyan Li, Xoel Mato Blanco, Alex Casella, Jinrui Liu, Genevieve Stein-O'Brien, Brian Caffo, Ricky S Adkins, Joshua Orvis, Ronna Hertzano, Anup Mahurkar, Jesse Gillis, Jonathan Werner, Shaojie Ma, Nicola Micali, Nenad Sestan, Pasko Rakic, Gabriel Santpere, Seth A Ament, Carlo Colantuoni
in silico transcriptome dissection of neocortical excitatory neurogenesis via joint matrix decomposition and transfer learning. bioRxiv : the preprint server for biology (2024)
Shreyash Sonthalia, Guangyan Li, Xoel Mato Blanco, Alex Casella, Jinrui Liu, Genevieve Stein-O'Brien, Brian Caffo, Ricky S Adkins, Joshua Orvis, Ronna Hertzano, Anup Mahurkar, Jesse Gillis, Jonathan Werner, Shaojie Ma, Nicola Micali, Nenad Sestan, Pasko Rakic, Gabriel Santpere, Seth A Ament, Carlo Colantuoni
in silico transcriptome dissection of neocortical excitatory neurogenesis via joint matrix decomposition and transfer learning. bioRxiv : the preprint server for biology (2024)
Shreyash Sonthalia, Guangyan Li, Xoel Mato Blanco, Alex Casella, Jinrui Liu, Genevieve Stein-O'Brien, Brian Caffo, Ricky S Adkins, Joshua Orvis, Ronna Hertzano, Anup Mahurkar, Jesse Gillis, Jonathan Werner, Shaojie Ma, Nicola Micali, Nenad Sestan, Pasko Rakic, Gabriel Santpere, Seth A Ament, Carlo Colantuoni
in silico transcriptome dissection of neocortical excitatory neurogenesis via joint matrix decomposition and transfer learning. bioRxiv : the preprint server for biology (2024)
Shreyash Sonthalia, Guangyan Li, Xoel Mato Blanco, Alex Casella, Jinrui Liu, Genevieve Stein-O'Brien, Brian Caffo, Shaun Adkins, Joshua Orvis, Ronna Hertzano, Anup Mahurkar, Jesse A Gillis, Jonathan Werner, Shaojie Ma, Nicola Micali, Nenad Sestan, Pasko Rakic, Gabriel Santpere Baro, Seth A Ament, Carlo Colantuoni
A Curated Compendium of Transcriptomic Data for the Exploration of Neocortical Development. bioRxiv : the preprint server for biology (2024)
Shreyash Sonthalia, Ricky S Adkins, Joshua Orvis, Guangyan Li, Xoel Mato Blanco, Alex Casella, Jinrui Liu, Genevieve Stein-O'Brien, Brian Caffo, Ronna Hertzano, Anup Mahurkar, Jesse Gillis, Jonathan Werner, Shaojie Ma, Nicola Micali, Nenad Sestan, Pasko Rakic, Gabriel Santpere, Seth A Ament, Carlo Colantuoni
A Curated Compendium of Transcriptomic Data for the Exploration of Neocortical Development. bioRxiv : the preprint server for biology (2024)
Shreyash Sonthalia, Guangyan Li, Xoel Mato Blanco, Alex Casella, Jinrui Liu, Genevieve Stein-O'Brien, Brian Caffo, Shaun Adkins, Joshua Orvis, Ronna Hertzano, Anup Mahurkar, Jesse A Gillis, Jonathan Werner, Shaojie Ma, Nicola Micali, Nenad Sestan, Pasko Rakic, Gabriel Santpere Baro, Seth A Ament, Carlo Colantuoni
A Curated Compendium of Transcriptomic Data for the Exploration of Neocortical Development. bioRxiv : the preprint server for biology (2024)
Shreyash Sonthalia, Guangyan Li, Xoel Mato Blanco, Alex Casella, Jinrui Liu, Genevieve Stein-O'Brien, Brian Caffo, Ricky S Adkins, Joshua Orvis, Ronna Hertzano, Anup Mahurkar, Jesse Gillis, Jonathan Werner, Shaojie Ma, Nicola Micali, Nenad Sestan, Pasko Rakic, Gabriel Santpere, Seth A Ament, Carlo Colantuoni
in silico transcriptome dissection of neocortical excitatory neurogenesis via joint matrix decomposition and transfer learning. bioRxiv : the preprint server for biology (2024)
Brian R Herb, Hannah J Glover, Aparna Bhaduri, Carlo Colantuoni, Tracy L Bale, Kimberly Siletti, Rebecca D Hodge, Ed S Lein, Arnold R Kriegstein, Claudia A Doege, Seth A Ament
Single-cell genomics reveals region-specific developmental trajectories underlying neuronal diversity in the human hypothalamus. Science advances 9 (45) (2023)
Seth A Ament, Marcia Cortes-Gutierrez, Brian R Herb, Evelina Mocci, Carlo Colantuoni, Margaret M McCarthy
A single-cell genomic atlas for maturation of the human cerebellum during early childhood. Science translational medicine (2023)
Huan Chen, Brian Caffo, Genevieve L Stein-O'Brien, Jinrui Liu, Ben Langmead, Carlo Colantuoni, Luo Xiao
Two-stage linked component analysis for joint decomposition of multiple biologically related data sets. Biostatistics (Oxford, England) 23 (4) (2022)
Alex M Casella, Carlo Colantuoni, Seth A Ament
Identifying enhancer properties associated with genetic risk for complex traits using regulome-wide association studies. PLoS computational biology 18 (9) (2022)
David W Nauen, Michael C Haffner, Juyun Kim, Qizhi Zheng, Hao Yin, Angelo M DeMarzo, Vasiliki Mahairaki, Carlo Colantuoni, J Geoffrey Pickering, Tory P Johnson
Putative Autoantigen Leiomodin-1 Is Expressed in the Human Brain and in the Membrane Fraction of Newly Formed Neurons. Pathogens (Basel, Switzerland) 9 (12) (2020)

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Publication Activity (10 Years)

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Carlo Colantuoni