Carolina Barra

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 20

Top Topics

Risk Assessment

Machine Learning

High Performance Liquid Chromatography

Top Venues

Communications biology

Nature communications

Journal of leukocyte biology

Genome medicine

This page only lists publications with an associated author ORCID identifier.

Publications

Emilie Egholm Bruun Jensen, Birkir Reynisson, Carolina Barra, Morten Nielsen
New light on the HLA-DR immunopeptidomic landscape. Journal of leukocyte biology (2024)
Hanqing Liao, Carolina Barra, Zhicheng Zhou, Xu Peng, Isaac B Woodhouse, Arun Tailor, Robert Parker, Alexia Carré, Persephone Borrow, Michael J Hogan, Wayne Paes, Laurence C Eisenlohr, Roberto Mallone, Morten Nielsen, Nicola Ternette
MARS an improved de novo peptide candidate selection method for non-canonical antigen target discovery in cancer. Nature communications 15 (1) (2024)
Hanqing Liao, Carolina Barra, Zhicheng Zhou, Xu Peng, Isaac B Woodhouse, Arun Tailor, Robert Parker, Alexia Carré, Persephone Borrow, Michael J Hogan, Wayne Paes, Laurence C Eisenlohr, Roberto Mallone, Morten Nielsen, Nicola Ternette
MARS an improved de novo peptide candidate selection method for non-canonical antigen target discovery in cancer. Nature communications 15 (1) (2024)
Hanqing Liao, Carolina Barra, Zhicheng Zhou, Xu Peng, Isaac B Woodhouse, Arun Tailor, Robert Parker, Alexia Carré, Persephone Borrow, Michael J Hogan, Wayne Paes, Laurence C Eisenlohr, Roberto Mallone, Morten Nielsen, Nicola Ternette
MARS an improved de novo peptide candidate selection method for non-canonical antigen target discovery in cancer. Nature communications 15 (1) (2024)
Emilie Egholm Bruun Jensen, Birkir Reynisson, Carolina Barra, Morten Nielsen
New light on the HLA-DR immunopeptidomic landscape. Journal of leukocyte biology 115 (5) (2024)
Emilie Egholm Bruun Jensen, Birkir Reynisson, Carolina Barra, Morten Nielsen
New light on the HLA-DR immunopeptidomic landscape. Journal of leukocyte biology 115 (5) (2024)
Hanqing Liao, Carolina Barra, Zhicheng Zhou, Xu Peng, Isaac B Woodhouse, Arun Tailor, Robert Parker, Alexia Carré, Persephone Borrow, Michael J Hogan, Wayne Paes, Laurence C Eisenlohr, Roberto Mallone, Morten Nielsen, Nicola Ternette
MARS an improved de novo peptide candidate selection method for non-canonical antigen target discovery in cancer. Nature communications 15 (1) (2024)
Hanqing Liao, Carolina Barra, Zhicheng Zhou, Xu Peng, Isaac B Woodhouse, Arun Tailor, Robert Parker, Alexia Carré, Persephone Borrow, Michael J Hogan, Wayne Paes, Laurence C Eisenlohr, Roberto Mallone, Morten Nielsen, Nicola Ternette
MARS an improved de novo peptide candidate selection method for non-canonical antigen target discovery in cancer. Nature communications 15 (1) (2024)
Hanqing Liao, Carolina Barra, Zhicheng Zhou, Xu Peng, Isaac B Woodhouse, Arun Tailor, Robert Parker, Alexia Carré, Persephone Borrow, Michael J Hogan, Wayne Paes, Laurence C Eisenlohr, Roberto Mallone, Morten Nielsen, Nicola Ternette
MARS an improved de novo peptide candidate selection method for non-canonical antigen target discovery in cancer. Nature communications 15 (1) (2024)
Emilie Egholm Bruun Jensen, Birkir Reynisson, Carolina Barra, Morten Nielsen
New light on the HLA-DR immunopeptidomic landscape. Journal of leukocyte biology 115 (5) (2024)
Yuchen Li, Peter Wad Sackett, Morten Nielsen, Carolina Barra
NetAllergen, a random forest model integrating MHC-II presentation propensity for improved allergenicity prediction. Bioinformatics advances 3 (1) (2023)
Jonas Birkelund Nilsson, Saghar Kaabinejadian, Hooman Yari, Bjoern Peters, Carolina Barra, Loren Gragert, William Hildebrand, Morten Nielsen
Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome. Communications biology 6 (1) (2023)
Jonas Birkelund Nilsson, Saghar Kaabinejadian, Hooman Yari, Bjoern Peters, Carolina Barra, Loren Gragert, William Hildebrand, Morten Nielsen
Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome. Communications biology 6 (1) (2023)
Jonas Birkelund Nilsson, Saghar Kaabinejadian, Hooman Yari, Bjoern Peters, Carolina Barra, Loren Gragert, William Hildebrand, Morten Nielsen
Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome. Communications biology 6 (1) (2023)
Jonas Birkelund Nilsson, Saghar Kaabinejadian, Hooman Yari, Bjoern Peters, Carolina Barra, Loren Gragert, William Hildebrand, Morten Nielsen
Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome. Communications biology 6 (1) (2023)
Jonas Birkelund Nilsson, Saghar Kaabinejadian, Hooman Yari, Bjoern Peters, Carolina Barra, Loren Gragert, William Hildebrand, Morten Nielsen
Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome. Communications biology 6 (1) (2023)
Jonas Birkelund Nilsson, Saghar Kaabinejadian, Hooman Yari, Bjoern Peters, Carolina Barra, Loren Gragert, William Hildebrand, Morten Nielsen
Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome. Communications biology 6 (1) (2023)
Jonas Birkelund Nilsson, Saghar Kaabinejadian, Hooman Yari, Bjoern Peters, Carolina Barra, Loren Gragert, William Hildebrand, Morten Nielsen
Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome. Communications biology 6 (1) (2023)
Anders Steenholdt Attermann, Carolina Barra, Birkir Reynisson, Heidi Schiøler Schultz, Ulrike Leurs, Kasper Lamberth, Morten Nielsen
Improved prediction of HLA antigen presentation hotspots: Applications for immunogenicity risk assessment of therapeutic proteins. Immunology 162 (2) (2020)
Carolina Barra, Bruno Alvarez, Sinu Paul, Alessandro Sette, Bjoern Peters, Massimo Andreatta, Søren Buus, Morten Nielsen
Footprints of antigen processing boost MHC class II natural ligand predictions. Genome medicine 10 (1) (2018)