Carsen Stringer

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 18

Top Venues

Nature methods

bioRxiv : the preprint server for biology

The Journal of neuroscience : the official journal of the Society for Neuroscience

Science (New York, N.Y.)

University of Pittsburgh (BSC)

This page only lists publications with an associated author ORCID identifier.

Education History

University of Pittsburgh Sep 04 2009 - May 25 2013

United States

BSC :: Applied Mathematics, Physics

Publications

Helen Farrants, Yichun Shuai, William C Lemon, Christian Monroy Hernandez, Deng Zhang, Shang Yang, Ronak Patel, Guanda Qiao, Michelle S Frei, Sarah E Plutkis, Jonathan B Grimm, Timothy L Hanson, Filip Tomaska, Glenn C Turner, Carsen Stringer, Philipp J Keller, Abraham G Beyene, Yao Chen, Yajie Liang, Luke D Lavis, Eric R Schreiter
A modular chemigenetic calcium indicator for multiplexed in vivo functional imaging. Nature methods (2024)
Marius Pachitariu, Shashwat Sridhar, Jacob Pennington, Carsen Stringer
Spike sorting with Kilosort4. Nature methods 21 (5) (2024)
Leandro P L Jacob, Sydney M Bailes, Stephanie D Williams, Carsen Stringer, Laura D Lewis
Distributed fMRI dynamics predict distinct EEG rhythms across sleep and wakefulness. bioRxiv : the preprint server for biology (2024)
Marius Pachitariu, Shashwat Sridhar, Jacob Pennington, Carsen Stringer
Spike sorting with Kilosort4. Nature methods 21 (5) (2024)
Marius Pachitariu, Shashwat Sridhar, Jacob Pennington, Carsen Stringer
Spike sorting with Kilosort4. Nature methods (2024)
Leandro P L Jacob, Sydney M Bailes, Stephanie D Williams, Carsen Stringer, Laura D Lewis
Distributed fMRI dynamics predict distinct EEG rhythms across sleep and wakefulness. bioRxiv : the preprint server for biology (2024)
Marius Pachitariu, Shashwat Sridhar, Jacob Pennington, Carsen Stringer
Spike sorting with Kilosort4. Nature methods 21 (5) (2024)
Xuyu Qian, Kyle Coleman, Shunzhou Jiang, Andrea J Kriz, Jack H Marciano, Chunyu Luo, Chunhui Cai, Monica Devi Manam, Emre Caglayan, Aoi Otani, Urmi Ghosh, Diane D Shao, Rebecca E Andersen, Jennifer E Neil, Robert Johnson, Alexandra LeFevre, Jonathan L Hecht, Michael B Miller, Liang Sun, Carsen Stringer, Mingyao Li, Christopher A Walsh
Spatial Single-cell Analysis Decodes Cortical Layer and Area Specification. bioRxiv : the preprint server for biology (2024)
Xuyu Qian, Kyle Coleman, Shunzhou Jiang, Andrea J Kriz, Jack H Marciano, Chunyu Luo, Chunhui Cai, Monica Devi Manam, Emre Caglayan, Aoi Otani, Urmi Ghosh, Diane D Shao, Rebecca E Andersen, Jennifer E Neil, Robert Johnson, Alexandra LeFevre, Jonathan L Hecht, Michael B Miller, Liang Sun, Carsen Stringer, Mingyao Li, Christopher A Walsh
Spatial Single-cell Analysis Decodes Cortical Layer and Area Specification. bioRxiv : the preprint server for biology (2024)
Helen Farrants, Yichun Shuai, William C Lemon, Christian Monroy Hernandez, Shang Yang, Ronak Patel, Guanda Qiao, Michelle S Frei, Jonathan B Grimm, Timothy L Hanson, Filip Tomaska, Glenn C Turner, Carsen Stringer, Philipp J Keller, Abraham G Beyene, Yao Chen, Yajie Liang, Luke D Lavis, Eric R Schreiter
A modular chemigenetic calcium indicator enables in vivo functional imaging with near-infrared light. bioRxiv : the preprint server for biology (2023)
Jonathan W Lovelace, Jingrui Ma, Saurabh Yadav, Karishma Chhabria, Hanbing Shen, Zhengyuan Pang, Tianbo Qi, Ruchi Sehgal, Yunxiao Zhang, Tushar Bali, Thomas Vaissiere, Shawn Tan, Yuejia Liu, Gavin Rumbaugh, Li Ye, David Kleinfeld, Carsen Stringer, Vineet Augustine
Vagal sensory neurons mediate the Bezold-Jarisch reflex and induce syncope. Nature (2023)
Atika Syeda, Lin Zhong, Renee Tung, Will Long, Marius Pachitariu, Carsen Stringer
Facemap: a framework for modeling neural activity based on orofacial tracking. Nature neuroscience (2023)
Marius Pachitariu, Carsen Stringer
Cellpose 2.0: how to train your own model. Nature methods 19 (12) (2022)
Kevin J Cutler, Carsen Stringer, Teresa W Lo, Luca Rappez, Nicholas Stroustrup, S Brook Peterson, Paul A Wiggins, Joseph D Mougous
Omnipose: a high-precision morphology-independent solution for bacterial cell segmentation. Nature methods 19 (11) (2022)
Edward Zagha, Jeffrey C Erlich, Soohyun Lee, Gyorgy Lur, Daniel H O'Connor, Nicholas A Steinmetz, Carsen Stringer, Hongdian Yang
The Importance of Accounting for Movement When Relating Neuronal Activity to Sensory and Cognitive Processes. The Journal of neuroscience : the official journal of the Society for Neuroscience 42 (8) (2022)
Carsen Stringer, Marius Pachitariu, Nicholas A Steinmetz, Charu Bai Reddy, Tatsuo K Sato, Kenneth D Harris
Spontaneous behaviors drive multidimensional, brainwide activity. Science (New York, N.Y.) 364 (6437) (2019)
Marius Pachitariu, Carsen Stringer, Kenneth D Harris
Robustness of Spike Deconvolution for Neuronal Calcium Imaging. The Journal of neuroscience : the official journal of the Society for Neuroscience 38 (37) (2018)
Carsen Stringer, Marius Pachitariu, Nicholas A Steinmetz, Michael Okun, Peter Bartho, Kenneth D Harris, Maneesh Sahani, Nicholas A Lesica
Inhibitory control of correlated intrinsic variability in cortical networks. eLife 5 (2016)

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Publication Activity (10 Years)

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Carsen Stringer