Daniel A Polasky

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 16

Top Venues

Analytical chemistry

Nature communications

Journal of the American Chemical Society

Journal of proteome research

University of Michigan (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

University of Michigan

United States

PHD :: Chemistry

Publications

Daniel A Polasky, Lei Lu, Fengchao Yu, Kai Li, Michael R Shortreed, Lloyd M Smith, Alexey I Nesvizhskii
Quantitative proteome-wide O-glycoproteomics analysis with FragPipe. Analytical and bioanalytical chemistry (2024)
Carolina Rojas Ramírez, Jessica Arlett Espino, Lisa M Jones, Daniel A Polasky, Alexey I Nesvizhskii
Efficient Analysis of Proteome-wide FPOP Data by FragPipe. bioRxiv : the preprint server for biology (2023)
Nikolas R Burton, Daniel A Polasky, Flowreen Shikwana, Samuel Ofori, Tianyang Yan, Daniel J Geiszler, Felipe da Veiga Leprevost, Alexey I Nesvizhskii, Keriann M Backus
Solid-Phase Compatible Silane-Based Cleavable Linker Enables Custom Isobaric Quantitative Chemoproteomics. Journal of the American Chemical Society (2023)
Carolina Rojas Ramírez, Jessica A Espino, Lisa M Jones, Daniel A Polasky, Alexey I Nesvizhskii
Efficient Analysis of Proteome-Wide FPOP Data by FragPipe. Analytical chemistry (2023)
Georges Bedran, Daniel A Polasky, Yi Hsiao, Fengchao Yu, Felipe da Veiga Leprevost, Javier Antonio Alfaro, Marcin Cieslik, Alexey I Nesvizhskii
Unraveling the glycosylated immunopeptidome with HLA-Glyco. Nature communications 14 (1) (2023)
Daniel J Geiszler, Daniel A Polasky, Fengchao Yu, Alexey I Nesvizhskii
Detecting diagnostic features in MS/MS spectra of post-translationally modified peptides. Nature communications 14 (1) (2023)
Cara I D'Amico, Daniel A Polasky, Daniel J Steyer, Brandon T Ruotolo, Robert T Kennedy
Ion Mobility-Mass Spectrometry Coupled to Droplet Microfluidics for Rapid Protein Structure Analysis and Drug Discovery. Analytical chemistry 94 (38) (2022)
Tianyang Yan, Andrew B Palmer, Daniel J Geiszler, Daniel A Polasky, Lisa M Boatner, Nikolas R Burton, Ernest Armenta, Alexey I Nesvizhskii, Keriann M Backus
Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Analytical chemistry 94 (9) (2022)
Daniel D Vallejo, Jukyung Kang, Jill Coghlan, Carolina Rojas Ramírez, Daniel A Polasky, Ruwan T Kurulugama, John C Fjeldsted, Anna A Schwendeman, Brandon T Ruotolo
Collision-Induced Unfolding Reveals Stability Differences in Infliximab Therapeutics under Native and Heat Stress Conditions. Analytical chemistry 93 (48) (2021)
Daniel A Polasky, Sugyan M Dixit, Michael F Keating, Varun V Gadkari, Philip C Andrews, Brandon T Ruotolo
Pervasive Charge Solvation Permeates Native-like Protein Ions and Dramatically Influences Top-down Sequencing Data. Journal of the American Chemical Society 142 (14) (2020)
Daniel A Polasky, Fengchao Yu, Guo Ci Teo, Alexey I Nesvizhskii
Fast and comprehensive N- and O-glycoproteomics analysis with MSFragger-Glyco. Nature methods 17 (11) (2020)
Guo Ci Teo, Daniel A Polasky, Fengchao Yu, Alexey I Nesvizhskii
Fast Deisotoping Algorithm and Its Implementation in the MSFragger Search Engine. Journal of proteome research 20 (1) (2020)
Daniel A Polasky, Sugyan M Dixit, Daniel D Vallejo, Kathryn D Kulju, Brandon T Ruotolo
An Algorithm for Building Multi-State Classifiers Based on Collision-Induced Unfolding Data. Analytical chemistry 91 (16) (2019)
Daniel A Polasky, Sugyan M Dixit, Sarah M Fantin, Brandon T Ruotolo
CIUSuite 2: Next-Generation Software for the Analysis of Gas-Phase Protein Unfolding Data. Analytical chemistry 91 (4) (2019)
Daniel D Vallejo, Daniel A Polasky, Ruwan T Kurulugama, Joseph D Eschweiler, John C Fjeldsted, Brandon T Ruotolo
A Modified Drift Tube Ion Mobility-Mass Spectrometer for Charge-Multiplexed Collision-Induced Unfolding. Analytical chemistry 91 (13) (2019)
Sarah M Fantin, Kristine F Parson, Shuai Niu, Jian Liu, Daniel A Polasky, Sugyan M Dixit, Shelagh M Ferguson-Miller, Brandon T Ruotolo
Collision Induced Unfolding Classifies Ligands Bound to the Integral Membrane Translocator Protein. Analytical chemistry 91 (24) (2019)

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Publication Activity (10 Years)

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Daniel A Polasky