Alexey I Nesvizhskii

ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 58

Top Venues

bioRxiv : the preprint server for biology

Nature communications

Journal of proteome research

Nature methods

University of Michigan

University of Washington (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Michigan Sep 01 2017

United States

Professor :: Pathology, Computational Medicine and Bioinformatics

University of Michigan - Aug 31 2017

United States

Associate Professor :: Pathology, Computational Medicine & Bioinformatics

University of Michigan

United States

Assistant Professor :: Pathology, Computational Medicine & Bioinformatics

Institute for Systems Biology

United States

Research Scientist

Institute for Systems Biology

United States

Postdoctoral Fellow

A.F. Ioffe Physico-Technical Institute

Russia

Research Assistant

Education History

University of Washington

United States

PHD :: Physics

Publications

Humberto J Ferreira, Brian J Stevenson, HuiSong Pak, Fengchao Yu, Jessica Almeida Oliveira, Florian Huber, Marie Taillandier-Coindard, Justine Michaux, Emma Ricart-Altimiras, Anne I Kraemer, Lana Elias Kandalaft, Daniel E Speiser, Alexey I Nesvizhskii, Markus Müller, Michal Bassani-Sternberg
Immunopeptidomics-based identification of naturally presented non-canonical circRNA-derived peptides. Nature communications 15 (1) (2024)
Ludwig Lautenbacher, Kevin L Yang, Tobias Kockmann, Christian Panse, Matthew Chambers, Elias Kahl, Fengchao Yu, Wassim Gabriel, Dulguun Bold, Tobias Schmidt, Kai Li, Brendan X MacLean, Alexey I Nesvizhskii, Mathias Wilhelm
Koina: Democratizing machine learning for proteomics research. bioRxiv : the preprint server for biology (2024)
Ludwig Lautenbacher, Kevin L Yang, Tobias Kockmann, Christian Panse, Matthew Chambers, Elias Kahl, Fengchao Yu, Wassim Gabriel, Dulguun Bold, Tobias Schmidt, Kai Li, Brendan X MacLean, Alexey I Nesvizhskii, Mathias Wilhelm
Koina: Democratizing machine learning for proteomics research. bioRxiv : the preprint server for biology (2024)
Ludwig Lautenbacher, Kevin L Yang, Tobias Kockmann, Christian Panse, Matthew Chambers, Elias Kahl, Fengchao Yu, Wassim Gabriel, Dulguun Bold, Tobias Schmidt, Kai Li, Brendan X MacLean, Alexey I Nesvizhskii, Mathias Wilhelm
Koina: Democratizing machine learning for proteomics research. bioRxiv : the preprint server for biology (2024)
Yumi Kwon, Jongmin Woo, Fengchao Yu, Sarah M Williams, Lye Meng Markillie, Ronald J Moore, Ernesto S Nakayasu, Jing Chen, Martha L Campbell-Thompson, Clayton E Mathews, Alexey I Nesvizhskii, Wei-Jun Qian, Ying Zhu
Proteome-scale tissue mapping using mass spectrometry based on label-free and multiplexed workflows. bioRxiv : the preprint server for biology (2024)
Lanbo Xiao, Abhijit Parolia, Yuanyuan Qiao, Pushpinder Singh Bawa, Sanjana Eyunni, Rahul Mannan, Sandra E Carson, Yu Chang, Xiaoju Wang, Yuping Zhang, Josh N Vo, Steven Kregel, Stephanie A Simko, Andrew D Delekta, Mustapha Jaber, Heng Zheng, Ingrid J Apel, Lisa McMurry, Fengyun Su, Rui Wang, Sylvia Zelenka-Wang, Sanjita Sasmal, Leena Khare, Subhendu Mukherjee, Chandrasekhar Abbineni, Kiran Aithal, Mital S Bhakta, Jay Ghurye, Xuhong Cao, Nora M Navone, Alexey I Nesvizhskii, Rohit Mehra, Ulka Vaishampayan, Marco Blanchette, Yuzhuo Z Wang, Susanta Samajdar, Murali Ramachandra, Arul M Chinnaiyan
Author Correction: Targeting SWI/SNF ATPases in enhancer-addicted prostate cancer. Nature (2024)
Yumi Kwon, Jongmin Woo, Fengchao Yu, Sarah M Williams, Lye Meng Markillie, Ronald J Moore, Ernesto S Nakayasu, Jing Chen, Martha L Campbell-Thompson, Clayton E Mathews, Alexey I Nesvizhskii, Wei-Jun Qian, Ying Zhu
Proteome-scale tissue mapping using mass spectrometry based on label-free and multiplexed workflows. bioRxiv : the preprint server for biology (2024)
Devon Kohler, Mateusz Staniak, Fengchao Yu, Alexey I Nesvizhskii, Olga Vitek
An MSstats workflow for detecting differentially abundant proteins in large-scale data-independent acquisition mass spectrometry experiments with FragPipe processing. Nature protocols (2024)
Yumi Kwon, Jongmin Woo, Fengchao Yu, Sarah M Williams, Lye Meng Markillie, Ronald J Moore, Ernesto S Nakayasu, Jing Chen, Martha L Campbell-Thompson, Clayton E Mathews, Alexey I Nesvizhskii, Wei-Jun Qian, Ying Zhu
Proteome-scale tissue mapping using mass spectrometry based on label-free and multiplexed workflows. bioRxiv : the preprint server for biology (2024)
Yuxin Mi, Katie L Burnham, Philip D Charles, Raphael Heilig, Iolanda Vendrell, Justin P Whalley, Hew D Torrance, David Benjamin Antcliffe, Shaun M May, Matthew J Neville, Georgina Berridge, Paula Hutton, Cyndi G Geoghegan, Jayachandran Radhakrishnan, Alexey I Nesvizhskii, Fengchao Yu, null null, Emma E Davenport, Stuart McKechnie, Roger Davies, David J P O'Callaghan, Parind Patel, Ana Gutierrez Del Arroyo, Fredrik Karpe, Anthony C Gordon, Gareth L Ackland, Charles J Hinds, Roman Fischer, Julian C Knight
High-throughput mass spectrometry maps the sepsis plasma proteome and differences in patient response. Science translational medicine 16 (750) (2024)
Yumi Kwon, Jongmin Woo, Fengchao Yu, Sarah M Williams, Lye Meng Markillie, Ronald J Moore, Ernesto S Nakayasu, Jing Chen, Martha L Campbell-Thompson, Clayton E Mathews, Alexey I Nesvizhskii, Wei-Jun Qian, Ying Zhu
Proteome-scale tissue mapping using mass spectrometry based on label-free and multiplexed workflows. bioRxiv : the preprint server for biology (2024)
Humberto J Ferreira, Brian J Stevenson, HuiSong Pak, Fengchao Yu, Jessica Almeida Oliveira, Florian Huber, Marie Taillandier-Coindard, Justine Michaux, Emma Ricart-Altimiras, Anne I Kraemer, Lana Elias Kandalaft, Daniel E Speiser, Alexey I Nesvizhskii, Markus Müller, Michal Bassani-Sternberg
Immunopeptidomics-based identification of naturally presented non-canonical circRNA-derived peptides. Nature communications 15 (1) (2024)
Maria E Gonzalez, Bryce Brophy, Ahmad Eido, Adele Elisabetta Leonetti, Sabra I Djomehri, Giuseppina Augimeri, Nicholas J Carruthers, Raymond G Cavalcante, Francesca Giordano, Sebastiano Andò, Alexey I Nesvizhskii, Eric R Fearon, Celina G Kleer
CCN6 suppresses metaplastic breast carcinoma by antagonizing WNT/β-catenin signaling to inhibit EZH2-driven EMT. Cancer research (2024)
Yumi Kwon, Jongmin Woo, Fengchao Yu, Sarah M Williams, Lye Meng Markillie, Ronald J Moore, Ernesto S Nakayasu, Jing Chen, Martha L Campbell-Thompson, Clayton E Mathews, Alexey I Nesvizhskii, Wei-Jun Qian, Ying Zhu
Proteome-scale tissue mapping using mass spectrometry based on label-free and multiplexed workflows. bioRxiv : the preprint server for biology (2024)
Yi Hsiao, Haijian Zhang, Ginny Xiaohe Li, Yamei Deng, Fengchao Yu, Hossein Valipour Kahrood, Joel Ricky Steele, Ralf Bernd Schittenhelm, Alexey I Nesvizhskii
Analysis and visualization of quantitative proteomics data using FragPipe-Analyst. bioRxiv : the preprint server for biology (2024)
Yuxin Mi, Katie L Burnham, Philip D Charles, Raphael Heilig, Iolanda Vendrell, Justin P Whalley, Hew D Torrance, David Benjamin Antcliffe, Shaun M May, Matthew J Neville, Georgina Berridge, Paula Hutton, Cyndi G Geoghegan, Jayachandran Radhakrishnan, Alexey I Nesvizhskii, Fengchao Yu, null null, Emma E Davenport, Stuart McKechnie, Roger Davies, David J P O'Callaghan, Parind Patel, Ana Gutierrez Del Arroyo, Fredrik Karpe, Anthony C Gordon, Gareth L Ackland, Charles J Hinds, Roman Fischer, Julian C Knight
High-throughput mass spectrometry maps the sepsis plasma proteome and differences in patient response. Science translational medicine 16 (750) (2024)
Yi Hsiao, Haijian Zhang, Ginny Xiaohe Li, Yamei Deng, Fengchao Yu, Hossein Valipour Kahrood, Joel Ricky Steele, Ralf Bernd Schittenhelm, Alexey I Nesvizhskii
Analysis and Visualization of Quantitative Proteomics Data Using FragPipe-Analyst. Journal of proteome research (2024)
Hye Kyong Kweon, Andy T Kong, Katherine E Hersberger, Shijiao Huang, Alexey I Nesvizhskii, Yanzhuang Wang, Kristina Håkansson, Philip C Andrews
Sulfoproteomics Workflow with Precursor Ion Accurate Mass Shift Analysis Reveals Novel Tyrosine Sulfoproteins in the Golgi. Journal of proteome research 23 (1) (2023)
Vi T Tang, Prabhodh S Abbineni, Felipe da Veiga Leprevost, Venkatesha Basrur, Rami Khoriaty, Brian T Emmer, Alexey I Nesvizhskii, David Ginsburg
Identification of LMAN1- and SURF4-Dependent Secretory Cargoes. Journal of proteome research (2023)
Zhenyu Tan, Yang Yue, Felipe da Veiga Leprevost, Sarah E Haynes, Venkatesha Basrur, Alexey I Nesvizhskii, Kristen J Verhey, Michael A Cianfrocco
Autoinhibited kinesin-1 adopts a hierarchical folding pattern. bioRxiv : the preprint server for biology (2023)
Zhenyu Tan, Yang Yue, Felipe da Veiga Leprevost, Sarah E Haynes, Venkatesha Basrur, Alexey I Nesvizhskii, Kristen J Verhey, Michael A Cianfrocco
Autoinhibited kinesin-1 adopts a hierarchical folding pattern. bioRxiv : the preprint server for biology (2023)
Nikolas R Burton, Daniel A Polasky, Flowreen Shikwana, Samuel Ofori, Tianyang Yan, Daniel J Geiszler, Felipe da Veiga Leprevost, Alexey I Nesvizhskii, Keriann M Backus
Solid-Phase Compatible Silane-Based Cleavable Linker Enables Custom Isobaric Quantitative Chemoproteomics. Journal of the American Chemical Society (2023)
Hye Kyong Kweon, Andy T Kong, Katherine E Hersberger, Shijiao Huang, Alexey I Nesvizhskii, Yanzhuang Wang, Kristina Håkansson, Philip C Andrews
Sulfoproteomics Workflow with Precursor Ion Accurate Mass Shift Analysis Reveals Novel Tyrosine Sulfoproteins in the Golgi. Journal of proteome research 23 (1) (2023)
Hana Popelka, Vikramjit Lahiri, Wayne D Hawkins, Felipe da Veiga Leprevost, Alexey I Nesvizhskii, Daniel J Klionsky
The Intrinsically Disordered N Terminus in Atg12 from Yeast Is Necessary for the Functional Structure of the Protein. International journal of molecular sciences 24 (20) (2023)
Hye Kyong Kweon, Andy T Kong, Katherine E Hersberger, Shijiao Huang, Alexey I Nesvizhskii, Yanzhuang Wang, Kristina Håkansson, Philip C Andrews
Sulfoproteomics Workflow with Precursor Ion Accurate Mass Shift Analysis Reveals Novel Tyrosine Sulfoproteins in the Golgi. Journal of proteome research (2023)
Zhenyu Tan, Yang Yue, Felipe da Veiga Leprevost, Sarah E Haynes, Venkatesha Basrur, Alexey I Nesvizhskii, Kristen J Verhey, Michael A Cianfrocco
Autoinhibited kinesin-1 adopts a hierarchical folding pattern. bioRxiv : the preprint server for biology (2023)
Vi T Tang, Prabhodh S Abbineni, Felipe da Veiga Leprevost, Venkatesha Basrur, Brian T Emmer, Alexey I Nesvizhskii, David Ginsburg
Identification of LMAN1 and SURF4 dependent secretory cargoes. bioRxiv : the preprint server for biology (2023)
Carolina Rojas Ramírez, Jessica A Espino, Lisa M Jones, Daniel A Polasky, Alexey I Nesvizhskii
Efficient Analysis of Proteome-Wide FPOP Data by FragPipe. Analytical chemistry (2023)
Amanpreet Kaur, Avrokin Surnilla, Anita J Zaitouna, Michael B Mumphrey, Venkatesha Basrur, Irina L Grigorova, Marcin Cieslik, Mary N Carrington, Alexey I Nesvizhskii, Malini Raghavan
Mass Spectrometric Profiling of HLA-B44 Peptidomes Provides Evidence for Tapasin-Mediated Tryptophan Editing. Journal of immunology (Baltimore, Md. : 1950) (2023)
Hye Kyong Kweon, Andy T Kong, Katherine E Hersberger, Shijiao Huang, Alexey I Nesvizhskii, Yanzhuang Wang, Kristina Håkansson, Philip C Andrews
Sulfoproteomics Workflow with Precursor Ion Accurate Mass Shift Analysis Reveals Novel Tyrosine Sulfoproteins in the Golgi. Journal of proteome research 23 (1) (2023)
Hye Kyong Kweon, Andy T Kong, Katherine E Hersberger, Shijiao Huang, Alexey I Nesvizhskii, Yanzhuang Wang, Kristina Håkansson, Philip C Andrews
Sulfoproteomics Workflow with Precursor Ion Accurate Mass Shift Analysis Reveals Novel Tyrosine Sulfoproteins in the Golgi. Journal of proteome research 23 (1) (2023)
Kevin L Yang, Fengchao Yu, Guo Ci Teo, Kai Li, Vadim Demichev, Markus Ralser, Alexey I Nesvizhskii
MSBooster: improving peptide identification rates using deep learning-based features. Nature communications 14 (1) (2023)
Georges Bedran, Daniel A Polasky, Yi Hsiao, Fengchao Yu, Felipe da Veiga Leprevost, Javier Antonio Alfaro, Marcin Cieslik, Alexey I Nesvizhskii
Unraveling the glycosylated immunopeptidome with HLA-Glyco. Nature communications 14 (1) (2023)
Daniel J Geiszler, Daniel A Polasky, Fengchao Yu, Alexey I Nesvizhskii
Detecting diagnostic features in MS/MS spectra of post-translationally modified peptides. Nature communications 14 (1) (2023)
Hye Kyong Kweon, Andy T Kong, Katherine E Hersberger, Shijiao Huang, Alexey I Nesvizhskii, Yanzhuang Wang, Kristina Håkansson, Philip C Andrews
Sulfoproteomics Workflow with Precursor Ion Accurate Mass Shift Analysis Reveals Novel Tyrosine Sulfoproteins in the Golgi. Journal of proteome research 23 (1) (2023)
Fengchao Yu, Guo Ci Teo, Andy T Kong, Klemens Fröhlich, Ginny Xiaohe Li, Vadim Demichev, Alexey I Nesvizhskii
Analysis of DIA proteomics data using MSFragger-DIA and FragPipe computational platform. Nature communications 14 (1) (2023)
Hye Kyong Kweon, Andy T Kong, Katherine E Hersberger, Shijiao Huang, Alexey I Nesvizhskii, Yanzhuang Wang, Kristina Håkansson, Philip C Andrews
Sulfoproteomics Workflow with Precursor Ion Accurate Mass Shift Analysis Reveals Novel Tyrosine Sulfoproteins in the Golgi. Journal of proteome research 23 (1) (2023)
Hye Kyong Kweon, Andy T Kong, Katherine E Hersberger, Shijiao Huang, Alexey I Nesvizhskii, Yanzhuang Wang, Kristina Håkansson, Philip C Andrews
Sulfoproteomics Workflow with Precursor Ion Accurate Mass Shift Analysis Reveals Novel Tyrosine Sulfoproteins in the Golgi. Journal of proteome research 23 (1) (2023)
Vadim Demichev, Lukasz Szyrwiel, Fengchao Yu, Guo Ci Teo, George A Rosenberger, Agathe Niewienda, Daniela Ludwig, Jens Decker, Stephanie Kaspar-Schoenefeld, Kathryn S Lilley, Michael Mülleder, Alexey I Nesvizhskii, Markus Ralser
dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts. Nature communications 13 (1) (2022)
Assaf Kacen, Aaron Javitt, Matthias P Kramer, David Morgenstern, Tomer Tsaban, Merav D Shmueli, Guo Ci Teo, Felipe da Veiga Leprevost, Eilon Barnea, Fengchao Yu, Arie Admon, Lea Eisenbach, Yardena Samuels, Ora Schueler-Furman, Yishai Levin, Alexey I Nesvizhskii, Yifat Merbl
Post-translational modifications reshape the antigenic landscape of the MHC I immunopeptidome in tumors. Nature biotechnology (2022)
Reta Birhanu Kitata, Wai-Kok Choong, Chia-Feng Tsai, Pei-Yi Lin, Bo-Shiun Chen, Yun-Chien Chang, Alexey I Nesvizhskii, Ting-Yi Sung, Yi-Ju Chen
A data-independent acquisition-based global phosphoproteomics system enables deep profiling. Nature communications 12 (1) (2021)
Lanbo Xiao, Abhijit Parolia, Yuanyuan Qiao, Pushpinder Singh Bawa, Sanjana Eyunni, Rahul Mannan, Sandra E Carson, Yu Chang, Xiaoju Wang, Yuping Zhang, Josh N Vo, Steven Kregel, Stephanie A Simko, Andrew D Delekta, Mustapha Jaber, Heng Zheng, Ingrid J Apel, Lisa McMurry, Fengyun Su, Rui Wang, Sylvia Zelenka-Wang, Sanjita Sasmal, Leena Khare, Subhendu Mukherjee, Chandrasekhar Abbineni, Kiran Aithal, Mital S Bhakta, Jay Ghurye, Xuhong Cao, Nora M Navone, Alexey I Nesvizhskii, Rohit Mehra, Ulka Vaishampayan, Marco Blanchette, Yuzhuo Z Wang, Susanta Samajdar, Murali Ramachandra, Arul M Chinnaiyan
Targeting SWI/SNF ATPases in enhancer-addicted prostate cancer. Nature 601 (7893) (2021)
April L Solon, Zhenyu Tan, Katherine L Schutt, Lauren Jepsen, Sarah E Haynes, Alexey I Nesvizhskii, David Sept, Jason Stumpff, Ryoma Ohi, Michael A Cianfrocco
Kinesin-binding protein remodels the kinesin motor to prevent microtubule binding. Science advances 7 (47) (2021)
Maik Müller, Fabienne Gräbnitz, Niculò Barandun, Yang Shen, Fabian Wendt, Sebastian N Steiner, Yannik Severin, Stefan U Vetterli, Milon Mondal, James R Prudent, Raphael Hofmann, Marc van Oostrum, Roman C Sarott, Alexey I Nesvizhskii, Erick M Carreira, Jeffrey W Bode, Berend Snijder, John A Robinson, Martin J Loessner, Annette Oxenius, Bernd Wollscheid
Light-mediated discovery of surfaceome nanoscale organization and intercellular receptor interaction networks. Nature communications 12 (1) (2021)
Sicong Wang, Chien-Wei Lin, Amber E Carleton, Chari L Cortez, Craig N Johnson, Linnea E Taniguchi, Nikola Sekulovski, Ryan F Townshend, Venkatesha Basrur, Alexey I Nesvizhskii, Peng Zou, Jianping Fu, Deborah L Gumucio, Mara C Duncan, Kenichiro Taniguchi
Spatially resolved cell polarity proteomics of a human epiblast model. Science advances 7 (17) (2021)
Sung-Soo Park, Daniela Ponce-Balbuena, Rork Kuick, Guadalupe Guerrero-Serna, Justin G Yoon, Dattatreya Mellacheruvu, Kevin P Conlon, Venkatesha Basrur, Alexey I Nesvizhskii, José Jalife, Jean-François Rual
Kir2.1 Interactome Mapping Uncovers PKP4 as a Modulator of the Kir2.1-Regulated Inward Rectifier Potassium Currents. Molecular & cellular proteomics : MCP 19 (9) (2020)
Meena Choi, Jeremy Carver, Cristina Chiva, Manuel Tzouros, Ting Huang, Tsung-Heng Tsai, Benjamin S Pullman, Oliver M Bernhardt, Ruth Hüttenhain, Guo Ci Teo, Yasset Perez Riverol, Jan Muntel, Maik Müller, Sandra Goetze, Maria Pavlou, Erik Verschueren, Bernd Wollscheid, Alexey I Nesvizhskii, Lukas Reiter, Tom Dunkley, Eduard Sabidó, Nuno Bandeira, Olga Vitek
MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets. Nature methods 17 (10) (2020)
Sabra I Djomehri, Maria E Gonzalez, Felipe da Veiga Leprevost, Shilpa R Tekula, Hui-Yin Chang, Marissa J White, Ashley Cimino-Mathews, Boris Burman, Venkatesha Basrur, Pedram Argani, Alexey I Nesvizhskii, Celina G Kleer
Quantitative proteomic landscape of metaplastic breast carcinoma pathological subtypes and their relationship to triple-negative tumors. Nature communications 11 (1) (2020)
Daniel A Polasky, Fengchao Yu, Guo Ci Teo, Alexey I Nesvizhskii
Fast and comprehensive N- and O-glycoproteomics analysis with MSFragger-Glyco. Nature methods 17 (11) (2020)
Daniel J Geiszler, Andy T Kong, Dmitry M Avtonomov, Fengchao Yu, Felipe da Veiga Leprevost, Alexey I Nesvizhskii
PTM-Shepherd: analysis and summarization of post-translational and chemical modifications from open search results. Molecular & cellular proteomics : MCP (2020)
Fengchao Yu, Guo Ci Teo, Andy T Kong, Sarah E Haynes, Dmitry M Avtonomov, Daniel J Geiszler, Alexey I Nesvizhskii
Identification of modified peptides using localization-aware open search. Nature communications 11 (1) (2020)
Song My Hoang, Nicole Kaminski, Ragini Bhargava, Jonathan Barroso-González, Michelle L Lynskey, Laura García-Expósito, Justin L Roncaioli, Anne R Wondisford, Callen T Wallace, Simon C Watkins, Dominic I James, Ian D Waddell, Donald Ogilvie, Kate M Smith, Felipe da Veiga Leprevost, Dattatreya Mellacheruvu, Alexey I Nesvizhskii, Jianfeng Li, Dominique Ray-Gallet, Robert William Sobol, Geneviève Almouzni, Roderick J O'Sullivan
Regulation of ALT-associated homology-directed repair by polyADP-ribosylation. Nature structural & molecular biology 27 (12) (2020)
Jesse G Meyer, Sushanth Mukkamalla, Hanno Steen, Alexey I Nesvizhskii, Bradford W Gibson, Birgit Schilling
PIQED: automated identification and quantification of protein modifications from DIA-MS data. Nature methods 14 (7) (2019)
James D R Knight, Hyungwon Choi, Gagan D Gupta, Laurence Pelletier, Brian Raught, Alexey I Nesvizhskii, Anne-Claude Gingras
ProHits-viz: a suite of web tools for visualizing interaction proteomics data. Nature methods 14 (7) (2019)
Talha Anwar, Caroline Arellano-Garcia, James Ropa, Yu-Chih Chen, Hong Sun Kim, Euisik Yoon, Sierrah Grigsby, Venkatesha Basrur, Alexey I Nesvizhskii, Andrew Muntean, Maria E Gonzalez, Kelley M Kidwell, Zaneta Nikolovska-Coleska, Celina G Kleer
p38-mediated phosphorylation at T367 induces EZH2 cytoplasmic localization to promote breast cancer metastasis. Nature communications 9 (1) (2018)
Yasset Perez Riverol, Mingze Bai, Felipe da Veiga Leprevost, Silvano Squizzato, Young Mi Park, Kenneth Haug, Adam J Carroll, J Dylan Spalding, Justin Paschall, Mingxun Wang, Noemi Del-Toro, Tobias Ternent, Peng Zhang, Nicola Buso, Nuno Bandeira, Eric W Deutsch, David S Campbell, Ronald C Beavis, Reza M Salek, Siddhant Tripathi, Robert Petryszak, Maria Keays, Eoin Fahy, Manish Sud, Shankar Subramaniam, Ariana Barbera, Rafael C Jiménez, Alexey I Nesvizhskii, Susanna-Assunta Sansone, Christoph Steinbeck, Rodrigo Lopez, Juan Antonio Vizcaino, Peipei Ping, Henning Hermjakob
Discovering and linking public omics data sets using the Omics Discovery Index. Nature biotechnology 35 (5) (2018)
Andy T Kong, Felipe da Veiga Leprevost, Dmitry M Avtonomov, Dattatreya Mellacheruvu, Alexey I Nesvizhskii
MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry-based proteomics. Nature methods 14 (5) (2017)
George A Rosenberger, Isabell Bludau, Uwe Schmitt, Moritz Heusel, Christie L Hunter, Yansheng Liu, Michael J MacCoss, Brendan X MacLean, Alexey I Nesvizhskii, Patrick G A Pedrioli, Lukas Reiter, Hannes L Röst, Stephen Tate, Ying Sonia Ting, Ben C Collins, Ruedi Aebersold
Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses. Nature methods 14 (9) (2017)

Alexey I Nesvizhskii.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Alexey I Nesvizhskii