David A Liberles

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 26

Top Topics

Top Venues

Journal of molecular evolution

BMC evolutionary biology

Genome biology and evolution

This page only lists publications with an associated author ORCID identifier.

Publications

Raquel Assis, Gavin Conant, Barbara Holland, David A Liberles, Malgorzata M O'Reilly, Amanda E Wilson
Models for the retention of duplicate genes and their biological underpinnings. F1000Research 12 (2024)
Raquel Assis, Gavin Conant, Barbara Holland, David A Liberles, Malgorzata M O'Reilly, Amanda E Wilson
Models for the retention of duplicate genes and their biological underpinnings. F1000Research 12 (2024)
Raquel Assis, Gavin Conant, Barbara Holland, David A Liberles, Malgorzata M O'Reilly, Amanda E Wilson
Models for the retention of duplicate genes and their biological underpinnings. F1000Research 12 (2024)
Raquel Assis, Gavin Conant, Barbara Holland, David A Liberles, Malgorzata M O'Reilly, Amanda E Wilson
Models for the retention of duplicate genes and their biological underpinnings. F1000Research 12 (2023)
Agusto R Luzuriaga-Neira, Andrew M Ritchie, Bryan L Payne, Oliver Carrillo-Parramon, David A Liberles, David Alvarez-Ponce
Highly Abundant Proteins Are Highly Thermostable. Genome biology and evolution 15 (7) (2023)
Raquel Assis, Gavin Conant, Barbara Holland, David A Liberles, Malgorzata M O'Reilly, Amanda E Wilson
Models for the retention of duplicate genes and their biological underpinnings. F1000Research 12 (2023)
Raquel Assis, Gavin Conant, Barbara Holland, David A Liberles, Malgorzata M O'Reilly, Amanda E Wilson
Models for the retention of duplicate genes and their biological underpinnings. F1000Research 12 (2023)
David A Liberles
A Genomic Conceptualization of Species. Journal of molecular evolution (2023)
C Nicholas Henry, Kathryn Piper, Amanda E Wilson, John L Miraszek, Claire S Probst, Yuying Rong, David A Liberles
WGDTree: a phylogenetic software tool to examine conditional probabilities of retention following whole genome duplication events. BMC bioinformatics 23 (1) (2022)
David A Liberles
The Memory Problem for Neutral Mutational Models of Evolution. Journal of molecular evolution 91 (1) (2022)
David A Liberles
The Memory Problem for Neutral Mutational Models of Evolution. Journal of molecular evolution 91 (1) (2022)
Tristan L Stark, David A Liberles
Characterizing Amino Acid Substitution with Complete Linkage of Sites on a Lineage. Genome biology and evolution 13 (10) (2022)
Ramanarayanan Krishnamurthy, Aaron David Goldman, David A Liberles, Karyn L Rogers, Yitzhak Tor
Nucleobases in Meteorites to Nucleobases in RNA and DNA? Journal of molecular evolution 90 (5) (2022)
David A Liberles
The Memory Problem for Neutral Mutational Models of Evolution. Journal of molecular evolution (2022)
David A Liberles
The Memory Problem for Neutral Mutational Models of Evolution. Journal of molecular evolution 91 (1) (2022)
David A Liberles
The Memory Problem for Neutral Mutational Models of Evolution. Journal of molecular evolution 91 (1) (2022)
Tristan L Stark, Rebecca S Kaufman, Maria A Maltepes, Peter B Chi, David A Liberles
Detecting Selection on Segregating Gene Duplicates in a Population. Journal of molecular evolution 89 (8) (2021)
Andrew M Ritchie, Tristan L Stark, David A Liberles
Inferring the number and position of changes in selective regime in a non-equilibrium mutation-selection framework. BMC ecology and evolution 21 (1) (2021)
Avery G A Selberg, Eric A Gaucher, David A Liberles
Ancestral Sequence Reconstruction: From Chemical Paleogenetics to Maximum Likelihood Algorithms and Beyond. Journal of molecular evolution 89 (3) (2021)
David E Northover, Stephen D Shank, David A Liberles
Characterizing lineage-specific evolution and the processes driving genomic diversification in chordates. BMC evolutionary biology 20 (1) (2020)
Ashley I Teufel, Andrew M Ritchie, Claus O Wilke, David A Liberles
Using the Mutation-Selection Framework to Characterize Selection on Protein Sequences. Genes 9 (8) (2018)
Alexander Platt, Claudia C Weber, David A Liberles
Protein evolution depends on multiple distinct population size parameters. BMC evolutionary biology 18 (1) (2018)
David A Liberles, Ashley I Teufel
Evolution and Structure of Proteins and Proteomes. Genes 9 (12) (2018)
Alena Orlenko, Peter B Chi, David A Liberles
Characterizing the roles of changing population size and selection on the evolution of flux control in metabolic pathways. BMC evolutionary biology 17 (1) (2017)
Peter B Chi, Dohyup Kim, Jason K Lai, Nadia Bykova, Claudia C Weber, Jan Kubelka, David A Liberles
A new parameter-rich structure-aware mechanistic model for amino acid substitution during evolution. Proteins 86 (2) (2017)
Russell A Hermansen, Benjamin P Oswald, Stormy Knight, Stephen D Shank, David Northover, Katharine L Korunes, Stephen N Michel, David A Liberles
The Adaptive Evolution Database (TAED): A New Release of a Database of Phylogenetically Indexed Gene Families from Chordates. Journal of molecular evolution 85 (1-2) (2017)