Dongbo Bu

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 10

Top Topics

Tissue Engineering

Top Venues

BMC bioinformatics

Communications biology

Bioinformatics (Oxford, England)

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Tiansu Gong, Fusong Ju, Dongbo Bu
Accurate prediction of RNA secondary structure including pseudoknots through solving minimum-cost flow with learned potentials. Communications biology 7 (1) (2024)
Tiansu Gong, Fusong Ju, Dongbo Bu
Accurate prediction of RNA secondary structure including pseudoknots through solving minimum-cost flow with learned potentials. Communications biology 7 (1) (2024)
Tiansu Gong, Fusong Ju, Dongbo Bu
Accurate prediction of RNA secondary structure including pseudoknots through solving minimum-cost flow with learned potentials. Communications biology 7 (1) (2024)
Bin Huang, Tingwen Fan, Kaiyue Wang, Haicang Zhang, Chungong Yu, Shuyu Nie, Yangshuo Qi, Wei-Mou Zheng, Jian Han, Zheng Fan, Chuncui Huang, Sheng Ye, Huaiyi Yang, Dongbo Bu
Accurate and efficient protein sequence design through learning concise local environment of residues. Bioinformatics (Oxford, England) 39 (3) (2023)
Xiaoyang Hou, Yu Wang, Dongbo Bu, Yaojun Wang, Chuncui Huang
EMNGly: predicting N-linked glycosylation sites using the language models for feature extraction. Bioinformatics (Oxford, England) 39 (11) (2023)
Fusong Ju, Jianwei Zhu, Bin Shao, Lupeng Kong, Tie-Yan Liu, Wei-Mou Zheng, Dongbo Bu
CopulaNet: Learning residue co-evolution directly from multiple sequence alignment for protein structure prediction. Nature communications 12 (1) (2021)
Lupeng Kong, Fusong Ju, Haicang Zhang, Shiwei Sun, Dongbo Bu
FALCON2: a web server for high-quality prediction of protein tertiary structures. BMC bioinformatics 22 (1) (2021)
Bin Huang, Guozheng Wei, Bing Wang, Fusong Ju, Yi Zhong, Zhuozheng Shi, Shiwei Sun, Dongbo Bu
Filling gaps of genome scaffolds via probabilistic searching optical maps against assembly graph. BMC bioinformatics 22 (1) (2021)
Qi Zhang, Jianwei Zhu, Fusong Ju, Lupeng Kong, Shiwei Sun, Wei-Mou Zheng, Dongbo Bu
ISSEC: inferring contacts among protein secondary structure elements using deep object detection. BMC bioinformatics 21 (1) (2020)
Haicang Zhang, Qi Zhang, Fusong Ju, Jianwei Zhu, Yujuan Gao, Ziwei Xie, Minghua Deng, Shiwei Sun, Wei-Mou Zheng, Dongbo Bu
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning. BMC bioinformatics 20 (1) (2019)