Ellen V Rothenberg

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 26

Top Venues

Nature immunology

NPJ systems biology and applications

Science immunology

Proceedings of the National Academy of Sciences of the United States of America

California Institute of Technology

Massachusetts Institute of Technology (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

California Institute of Technology Jun 01 1982

United States

Albert Billings Ruddock Professor of Biology (current title) :: Division of Biology and Biological Engineering

Salk Institute

United States

Assistant Research Professor :: Department of Cell Biology

Education History

Massachusetts Institute of Technology

United States

PHD :: Department of Biology

Publications

Emil Andersson, Ellen V Rothenberg, Carsten Peterson, Victor Olariu
T-cell commitment inheritance-an agent-based multi-scale model. NPJ systems biology and applications 10 (1) (2024)
Boyoung Shin, Samantha J Chang, Brendan W MacNabb, Ellen V Rothenberg
Transcriptional network dynamics in early T cell development. The Journal of experimental medicine 221 (10) (2024)
Emil Andersson, Ellen V Rothenberg, Carsten Peterson, Victor Olariu
T-cell commitment inheritance-an agent-based multi-scale model. NPJ systems biology and applications 10 (1) (2024)
Emil Andersson, Ellen V Rothenberg, Carsten Peterson, Victor Olariu
T-cell commitment inheritance-an agent-based multi-scale model. NPJ systems biology and applications 10 (1) (2024)
Emil Andersson, Ellen V Rothenberg, Carsten Peterson, Victor Olariu
T-cell commitment inheritance-an agent-based multi-scale model. NPJ systems biology and applications 10 (1) (2024)
Emil Andersson, Ellen V Rothenberg, Carsten Peterson, Victor Olariu
T-cell commitment inheritance-an agent-based multi-scale model. NPJ systems biology and applications 10 (1) (2024)
Boyoung Shin, Wen Zhou, Jue Wang, Fan Gao, Ellen V Rothenberg
Runx factors launch T cell and innate lymphoid programs via direct and gene network-based mechanisms. Nature immunology (2023)
Emil Andersson, Ellen V Rothenberg, Carsten Peterson, Victor Olariu
T-cell commitment inheritance - an agent-based multi-scale model. bioRxiv : the preprint server for biology (2023)
Rosanne Spolski, Peng Li, Vivek Chandra, Boyoung Shin, Shubham Goel, Keiko Sakamoto, Chengyu Liu, Jangsuk Oh, Min Ren, Yutaka Enomoto, Erin E West, Stephen M Christensen, Edwin C K Wan, Meili Ge, Jian-Xin Lin, Bingyu Yan, Majid Kazemian, Zu-Xi Yu, Keisuke Nagao, Pandurangan Vijayanand, Ellen V Rothenberg, Warren J Leonard
Distinct use of super-enhancer elements controls cell type-specific CD25 transcription and function. Science immunology 8 (89) (2023)
Boyoung Shin, Wen Zhou, Jue Wang, Fan Gao, Ellen V Rothenberg
Author Correction: Runx factors launch T cell and innate lymphoid programs via direct and gene network-based mechanisms. Nature immunology (2023)
Brendan W MacNabb, Ellen V Rothenberg
Speed and navigation control of thymocyte development by the fetal T-cell gene regulatory network. Immunological reviews (2023)
Brendan W MacNabb, Ellen V Rothenberg
Speed and navigation control of thymocyte development by the fetal T-cell gene regulatory network. Immunological reviews (2023)
Wen Zhou, Fan Gao, Maile Romero-Wolf, Suin Jo, Ellen V Rothenberg
Single-cell deletion analyses show control of pro-T cell developmental speed and pathways by Tcf7, Spi1, Gata3, Bcl11a, Erg, and Bcl11b. Science immunology 7 (71) (2022)
Ellen V Rothenberg
The Heart of the Machine: Construction of T Cell Identity, Made Accessible. Journal of immunology (Baltimore, Md. : 1950) 209 (7) (2022)
Hiroyuki Hosokawa, Maria Koizumi, Kaori Masuhara, Maile Romero-Wolf, Tomoaki Tanaka, Toshinori Nakayama, Ellen V Rothenberg
Stage-specific action of Runx1 and GATA3 controls silencing of PU.1 expression in mouse pro-T cells. The Journal of experimental medicine 218 (8) (2021)
Boyoung Shin, Hiroyuki Hosokawa, Maile Romero-Wolf, Wen Zhou, Kaori Masuhara, Victoria R Tobin, Ditsa Levanon, Yoram Groner, Ellen V Rothenberg
Runx1 and Runx3 drive progenitor to T-lineage transcriptome conversion in mouse T cell commitment via dynamic genomic site switching. Proceedings of the National Academy of Sciences of the United States of America 118 (4) (2021)
Xun Wang, Ellen V Rothenberg
Illuminating the core of adaptive immunity-how the regulatory genome controls Rag chromatin dynamics. Science immunology 5 (51) (2020)
Hiroyuki Hosokawa, Ellen V Rothenberg
How transcription factors drive choice of the T cell fate. Nature reviews. Immunology 21 (3) (2020)
Ellen V Rothenberg
Programming for T-lymphocyte fates: modularity and mechanisms. Genes & development 33 (17-18) (2019)
Kenneth Kh Ng, Mary A Yui, Arnav Mehta, Sharmayne Siu, Blythe Irwin, Shirley Pease, Satoshi Hirose, Michael B Elowitz, Ellen V Rothenberg, Hao Yuan Kueh
A stochastic epigenetic switch controls the dynamics of T-cell lineage commitment. eLife 7 (2018)
Jonas Ungerbäck, Hiroyuki Hosokawa, Xun Wang, Tobias Strid, Brian A Williams, Mikael Sigvardsson, Ellen V Rothenberg
Pioneering, chromatin remodeling, and epigenetic constraint in early T-cell gene regulation by SPI1 (PU.1). Genome research 28 (10) (2018)
William J R Longabaugh, Weihua Zeng, Jingli A Zhang, Hiroyuki Hosokawa, Camden S Jansen, Long Li, Maile Romero-Wolf, Pentao Liu, Hao Yuan Kueh, Ali Mortazavi, Ellen V Rothenberg
Bcl11b and combinatorial resolution of cell fate in the T-cell gene regulatory network. Proceedings of the National Academy of Sciences of the United States of America 114 (23) (2018)
Hiroyuki Hosokawa, Maile Romero-Wolf, Mary A Yui, Jonas Ungerbäck, Maria L G Quiloan, Masaki Matsumoto, Keiichi I Nakayama, Tomoaki Tanaka, Ellen V Rothenberg
Bcl11b sets pro-T cell fate by site-specific cofactor recruitment and by repressing Id2 and Zbtb16. Nature immunology 19 (12) (2018)
Zhiheng He, Jian Ma, Ruiqing Wang, Jing Zhang, Zhaofeng Huang, Fei Wang, Subha Sen, Ellen V Rothenberg, Zuoming Sun
A two-amino-acid substitution in the transcription factor RORγt disrupts its function in TH17 differentiation but not in thymocyte development. Nature immunology 18 (10) (2017)
Ageliki Tsagaratou, Edahí González-Avalos, Sini Rautio, James P Scott-Browne, Susan Togher, William A Pastor, Ellen V Rothenberg, Lukas Chavez, Harri Lähdesmäki, Anjana Rao
TET proteins regulate the lineage specification and TCR-mediated expansion of iNKT cells. Nature immunology 18 (1) (2016)
Hao Yuan Kueh, Mary A Yui, Kenneth K H Ng, Shirley S Pease, Jingli A Zhang, Sagar S Damle, George Freedman, Sharmayne Siu, Irwin D Bernstein, Michael B Elowitz, Ellen V Rothenberg
Asynchronous combinatorial action of four regulatory factors activates Bcl11b for T cell commitment. Nature immunology 17 (8) (2016)

Ellen V Rothenberg.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Ellen V Rothenberg