Emil Alexov

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 27

Top Topics

Breast Cancer Risk

Pseudomonas Aeruginosa

Molecular Dynamics Simulations

Machine Learning

Top Venues

International journal of molecular sciences

Journal of computational chemistry

Scientific reports

This page only lists publications with an associated author ORCID identifier.

Publications

Preeti Pandey, Emil Alexov
Most Monogenic Disorders Are Caused by Mutations Altering Protein Folding Free Energy. International journal of molecular sciences 25 (4) (2024)
Preeti Pandey, Emil Alexov
Most Monogenic Disorders Are Caused by Mutations Altering Protein Folding Free Energy. International journal of molecular sciences 25 (4) (2024)
Preeti Pandey, Emil Alexov
Most Monogenic Disorders Are Caused by Mutations Altering Protein Folding Free Energy. International journal of molecular sciences 25 (4) (2024)
Preeti Pandey, Emil Alexov
Most Monogenic Disorders Are Caused by Mutations Altering Protein Folding Free Energy. International journal of molecular sciences 25 (4) (2024)
Preeti Pandey, Shailesh Kumar Panday, Prawin Rimal, Nicolas Ancona, Emil Alexov
Predicting the Effect of Single Mutations on Protein Stability and Binding with Respect to Types of Mutations. International journal of molecular sciences 24 (15) (2023)
Shengjie Sun, Pitambar Poudel, Emil Alexov, Lin Li
Electrostatics in Computational Biophysics and Its Implications for Disease Effects. International journal of molecular sciences 23 (18) (2022)
Shailesh Kumar Panday, Emil Alexov
Protein-Protein Binding Free Energy Predictions with the MM/PBSA Approach Complemented with the Gaussian-Based Method for Entropy Estimation. ACS omega 7 (13) (2022)
Gen Li, Shailesh Kumar Panday, Emil Alexov
SAAFEC-SEQ: A Sequence-Based Method for Predicting the Effect of Single Point Mutations on Protein Thermodynamic Stability. International journal of molecular sciences 22 (2) (2021)
Bohua Wu, William Hand, Emil Alexov
Opioid Addiction and Opioid Receptor Dimerization: Structural Modeling of the OPRD1 and OPRM1 Heterodimer and Its Signaling Pathways. International journal of molecular sciences 22 (19) (2021)
Mahesh Koirala, H B Mihiri Shashikala, Jacob Jeffries, Bohua Wu, Stacie K Loftus, Jonathan H Zippin, Emil Alexov
Computational Investigation of the pH Dependence of Stability of Melanosome Proteins: Implication for Melanosome formation and Disease. International journal of molecular sciences 22 (15) (2021)
H B Mihiri Shashikala, Arghya Chakravorty, Shailesh Kumar Panday, Emil Alexov
BION-2: Predicting Positions of Non-Specifically Bound Ions on Protein Surface by a Gaussian-Based Treatment of Electrostatics. International journal of molecular sciences 22 (1) (2020)
Swagata Pahari, Gen Li, Adithya Krishna Murthy, Siqi Liang, Robert Fragoza, Haiyuan Yu, Emil Alexov
SAAMBE-3D: Predicting Effect of Mutations on Protein-Protein Interactions. International journal of molecular sciences 21 (7) (2020)
Satishkumar Ranganathan Ganakammal, Emil Alexov
An Ensemble Approach to Predict the Pathogenicity of Synonymous Variants. Genes 11 (9) (2020)
Arghya Chakravorty, Shailesh Panday, Swagata Pahari, Shan Zhao, Emil Alexov
Capturing the Effects of Explicit Waters in Implicit Electrostatics Modeling: Qualitative Justification of Gaussian-Based Dielectric Models in DelPhi. Journal of chemical information and modeling 60 (4) (2020)
Satishkumar Ranganathan Ganakammal, Emil Alexov
Evaluation of performance of leading algorithms for variant pathogenicity predictions and designing a combinatory predictor method: application to Rett syndrome variants. PeerJ 7 (2019)
Arghya Chakravorty, Emilio Gallicchio, Emil Alexov
A grid-based algorithm in conjunction with a gaussian-based model of atoms for describing molecular geometry. Journal of computational chemistry 40 (12) (2019)
Nayere Tajielyato, Emil Alexov
Processivity vs. Beating: Comparing Cytoplasmic and Axonemal Dynein Microtubule Binding Domain Association with Microtubule. International journal of molecular sciences 20 (5) (2019)
Bohua Wu, Yunhui Peng, Julia Eggert, Emil Alexov
Novel Genetic Markers for Early Detection of Elevated Breast Cancer Risk in Women. International journal of molecular sciences 20 (19) (2019)
Chuan Li, Zhe Jia, Arghya Chakravorty, Swagata Pahari, Yunhui Peng, Sankar Basu, Mahesh Koirala, Shailesh Kumar Panday, Marharyta Petukh, Lin Li, Emil Alexov
DelPhi Suite: New Developments and Review of Functionalities. Journal of computational chemistry 40 (28) (2019)
Arghya Chakravorty, Zhe Jia, Lin Li, Shan Zhao, Emil Alexov
Reproducing the Ensemble Average Polar Solvation Energy of a Protein from a Single Structure: Gaussian-Based Smooth Dielectric Function for Macromolecular Modeling. Journal of chemical theory and computation 14 (2) (2018)
Yunhui Peng, Rebecca Myers, Wenxing Zhang, Emil Alexov
Computational Investigation of the Missense Mutations in DHCR7 Gene Associated with Smith-Lemli-Opitz Syndrome. International journal of molecular sciences 19 (1) (2018)
Swagata Pahari, Lexuan Sun, Sankar Basu, Emil Alexov
DelPhiPKa: Including salt in the calculations and enabling polar residues to titrate. Proteins 86 (12) (2018)
Nayere Tajielyato, Lin Li, Yunhui Peng, Joshua Daniel Alper, Emil Alexov
E-hooks provide guidance and a soft landing for the microtubule binding domain of dynein. Scientific reports 8 (1) (2018)
Arghya Chakravorty, Zhe Jia, Lin Li, Emil Alexov
A New DelPhi Feature for Modeling Electrostatic Potential around Proteins: Role of Bound Ions and Implications for Zeta-Potential. Langmuir : the ACS journal of surfaces and colloids 33 (9) (2017)
Zhe Jia, Lin Li, Arghya Chakravorty, Emil Alexov
Treating ion distribution with Gaussian-based smooth dielectric function in DelPhi. Journal of computational chemistry 38 (22) (2017)
Laurel Hoffman, Lin Li, Emil Alexov, Hugo Sanabria, Melvin Neal Waxham
Cytoskeletal-like Filaments of Ca2+-Calmodulin-Dependent Protein Kinase II Are Formed in a Regulated and Zn2+-Dependent Manner. Biochemistry 56 (15) (2017)
Lin Li, Zhe Jia, Yunhui Peng, Subash Godar, Ivan Getov, Shaolei Teng, Joshua Daniel Alper, Emil Alexov
Forces and Disease: Electrostatic force differences caused by mutations in kinesin motor domains can distinguish between disease-causing and non-disease-causing mutations. Scientific reports 7 (1) (2017)