Isidore Rigoutsos (I Rigoutsos)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 16

Top Venues

Thomas Jefferson University

New York University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Thomas Jefferson University

United States

Professor and Director :: Computational Medicine Center

Education History

New York University

United States

PHD :: Computer Science

Publications

Tess Cherlin, Yi Jing, Siddhartha Shah, Anne Kennedy, Aristeidis G Telonis, Venetia Pliatsika, Haley Wilson, Lily Thompson, Panagiotis I Vlantis, Phillipe Loher, Benjamin Leiby, Isidore Rigoutsos
The subcellular distribution of miRNA isoforms, tRNA-derived fragments, and rRNA-derived fragments depends on nucleotide sequence and cell type. BMC biology 22 (1) (2024)
Venetia Pliatsika, Tess Cherlin, Phillipe Loher, Panagiotis Vlantis, Parth Nagarkar, Stepan Nersisyan, Isidore Rigoutsos
MINRbase: a comprehensive database of nuclear- and mitochondrial-ribosomal-RNA-derived fragments (rRFs). Nucleic acids research (2023)
Robert Brian Akins, Kayleigh Ostberg, Tess Cherlin, Nikolas J Tsiouplis, Phillipe Loher, Isidore Rigoutsos
The Typical tRNA Co-Expresses Multiple 5' tRNA Halves Whose Sequences and Abundances Depend on Isodecoder and Isoacceptor and Change with Tissue Type, Cell Type, and Disease. Non-coding RNA 9 (6) (2023)
Nestoras Karathanasis, Daniel Hwang, Vibol Heng, Rimal Abhimannyu, Phillip Slogoff-Sevilla, Gina Buchel, Victoria S Frisbie, Peiyao Li, Dafni Kryoneriti, Isidore Rigoutsos
Reproducibility efforts as a teaching tool: A pilot study. PLoS computational biology 18 (11) (2022)
Jennifer L Hope, Manzhi Zhao, Christopher J Stairiker, Caoimhe H Kiernan, Alison J Carey, Yvonne M Mueller, Marjan van Meurs, Inge Brouwers-Haspels, Dennis C Otero, Eun-Ah Bae, Hannah A Faso, Alex Maas, Hans de Looper, Paolo M Fortina, Isidore Rigoutsos, Linda M Bradley, Stefan J Erkeland, Peter D Katsikis
MicroRNA-139 Expression Is Dispensable for the Generation of Influenza-Specific CD8 + T Cell Responses. Journal of immunology (Baltimore, Md. : 1950) 208 (3) (2022)
Megumi Shigematsu, Takuya Kawamura, Keisuke Morichika, Natsuko Izumi, Takashi Kiuchi, Shozo Honda, Venetia Pliatsika, Ryuma Matsubara, Isidore Rigoutsos, Susumu Katsuma, Yukihide Tomari, Yohei Kirino
RNase κ promotes robust piRNA production by generating 2',3'-cyclic phosphate-containing precursors. Nature communications 12 (1) (2021)
Emi Dika, Elisabetta Broseghini, Elisa Porcellini, Martina Lambertini, Mattia Riefolo, Giorgio Durante, Phillipe Loher, Roberta Roncarati, Cristian Bassi, Cosimo Misciali, Massimo Negrini, Isidore Rigoutsos, Eric Londin, Annalisa Patrizi, Manuela Ferracin
Unraveling the role of microRNA/isomiR network in multiple primary melanoma pathogenesis. Cell death & disease 12 (5) (2021)
Aristeidis G Telonis, Isidore Rigoutsos
The transcriptional trajectories of pluripotency and differentiation comprise genes with antithetical architecture and repetitive-element content. BMC biology 19 (1) (2021)
Tess Cherlin, Rogan Magee, Yi Jing, Venetia Pliatsika, Phillipe Loher, Isidore Rigoutsos
Ribosomal RNA fragmentation into short RNAs (rRFs) is modulated in a sex- and population of origin-specific manner. BMC biology 18 (1) (2020)
Martin Pichler, Cristian Rodríguez-Aguayo, Su Youn Nam, Mihnea Paul Dragomir, Recep Bayraktar, Simone Anfossi, Erik Knutsen, Cristina Ivan, Enrique Fuentes-Mattei, Sang Kil Lee, Hui Ling, Tina Catela Ivkovic, Guoliang Huang, Li Huang, Yoshinaga Okugawa, Hiroyuki Katayama, Ayumu Taguchi, Emine Bayraktar, Rajat Bhattacharya, Paola Amero, William Ruixian He, Anh M Tran, Petra Vychytilova-Faltejskova, Christiane Klec, Diana L Bonilla, Xinna Zhang, Sanja Kapitanovic, Bozo Loncar, Roberta Gafà, Zhihui Wang, Vittorio Cristini, Samir M Hanash, Menashe Bar-Eli, Giovanni Lanza, Ondrej Slaby, Ajay Goel, Isidore Rigoutsos, Gabriel Lopez-Berestein, George Adrian Calin
Therapeutic potential of FLANC, a novel primate-specific long non-coding RNA in colorectal cancer. Gut 69 (10) (2020)
Eric Londin, Rogan Magee, Carol L Shields, Sara E Lally, Takami Sato, Isidore Rigoutsos
IsomiRs and tRNA-derived fragments are associated with metastasis and patient survival in uveal melanoma. Pigment cell & melanoma research 33 (1) (2019)
Kamlesh Pawar, Megumi Shigematsu, Phillipe Loher, Shozo Honda, Isidore Rigoutsos, Yohei Kirino
Exploration of CCA-added RNAs revealed the expression of mitochondrial non-coding RNAs regulated by CCA-adding enzyme. RNA biology 16 (12) (2019)
Aristeidis G Telonis, Phillipe Loher, Rogan Magee, Venetia Pliatsika, Eric Londin, Yohei Kirino, Isidore Rigoutsos
tRNA Fragments Show Intertwining with mRNAs of Specific Repeat Content and Have Links to Disparities. Cancer research 79 (12) (2019)
Rogan G Magee, Aristeidis G Telonis, Phillipe Loher, Eric Londin, Isidore Rigoutsos
Profiles of miRNA Isoforms and tRNA Fragments in Prostate Cancer. Scientific reports 8 (1) (2018)
Shozo Honda, Phillipe Loher, Keisuke Morichika, Megumi Shigematsu, Takuya Kawamura, Yoriko Kirino, Isidore Rigoutsos, Yohei Kirino
Increasing cell density globally enhances the biogenesis of Piwi-interacting RNAs in Bombyx mori germ cells. Scientific reports 7 (1) (2017)
H Zhou, Aristeidis G Telonis, Y Jing, N L Xia, L Biederman, M Jimbo, F Blanco, E Londin, J R Brody, Isidore Rigoutsos
GPRC5A is a potential oncogene in pancreatic ductal adenocarcinoma cells that is upregulated by gemcitabine with help from HuR. Cell death & disease 7 (2016)

Isidore Rigoutsos.css-eqlu8i{font-size:small;padding-left:4px;} (I Rigoutsos)

Publication Activity (10 Years)

Top Topics

Top Venues

Isidore Rigoutsos (I Rigoutsos)