Jesse L Berry (Jesse Berry)

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 33

Top Topics

Intellectual Disability

Dna Methylation

Optical Coherence Tomography

Top Venues

Genes, chromosomes & cancer

International journal of molecular sciences

Pediatric blood & cancer

This page only lists publications with an associated author ORCID identifier.

Publications

Shreya Sirivolu, Chen-Ching Peng, Paolo Neviani, Benjamin Y Xu, Jesse L Berry, Liya Xu
Comparative Single Vesicle Analysis of Aqueous Humor Extracellular Vesicles before and after Radiation in Uveal Melanoma Eyes. International journal of molecular sciences 25 (11) (2024)
Shreya Sirivolu, Chen-Ching Peng, Paolo Neviani, Benjamin Y Xu, Jesse L Berry, Liya Xu
Comparative Single Vesicle Analysis of Aqueous Humor Extracellular Vesicles before and after Radiation in Uveal Melanoma Eyes. International journal of molecular sciences 25 (11) (2024)
Kevin Stachelek, Narine Harutyunyan, Susan Lee, Assaf Beck, Jonathan Kim, Liya Xu, Jesse L Berry, Aaron Nagiel, C Patrick Reynolds, A Linn Murphree, Thomas C Lee, Jennifer G Aparicio, David Cobrinik
Non-synonymous, synonymous, and non-coding nucleotide variants contribute to recurrently altered biological processes during retinoblastoma progression. Genes, chromosomes & cancer 62 (5) (2023)
Kevin Stachelek, Narine Harutyunyan, Susan Lee, Assaf Beck, Jonathan Kim, Liya Xu, Jesse L Berry, Aaron Nagiel, C Patrick Reynolds, A Linn Murphree, Thomas C Lee, Jennifer G Aparicio, David Cobrinik
Non-synonymous, synonymous, and non-coding nucleotide variants contribute to recurrently altered biological processes during retinoblastoma progression. Genes, chromosomes & cancer 62 (5) (2023)
Kevin Stachelek, Narine Harutyunyan, Susan Lee, Assaf Beck, Jonathan Kim, Liya Xu, Jesse L Berry, Aaron Nagiel, C Patrick Reynolds, A Linn Murphree, Thomas C Lee, Jennifer G Aparicio, David Cobrinik
Non-synonymous, synonymous, and non-coding nucleotide variants contribute to recurrently altered biological processes during retinoblastoma progression. Genes, chromosomes & cancer 62 (5) (2023)
Kevin Stachelek, Narine Harutyunyan, Susan Lee, Assaf Beck, Jonathan Kim, Liya Xu, Jesse L Berry, Aaron Nagiel, C Patrick Reynolds, A Linn Murphree, Thomas C Lee, Jennifer G Aparicio, David Cobrinik
Non-synonymous, synonymous, and non-coding nucleotide variants contribute to recurrently altered biological processes during retinoblastoma progression. Genes, chromosomes & cancer 62 (5) (2023)
Kris Ann P Schultz, Murali Chintagumpala, Jin Piao, Kenneth S Chen, Robyn D Gartrell, Emily Christison-Lagay, Jesse L Berry, Rachana Shah, Theodore W Laetsch, null null
Children's Oncology Group's 2023 blueprint for research: Rare tumors. Pediatric blood & cancer (2023)
Yingxiu Luo, Mingpeng Xu, Ludi Yang, Yiran Yao, Jesse L Berry, Liya Xu, Xuyang Wen, Xiaoyu He, Minglei Han, Xianqun Fan, Xianqun Fan, Renbing Jia
Correlating somatic copy number alteration in aqueous humour cfDNA with chemotherapy history, eye salvage and pathological features in retinoblastoma. The British journal of ophthalmology (2023)
Jesse L Berry, Elias I Traboulsi, Francis L Munier
A. Linn Murphree, MD: the Mississippi man who conquered retinoblastoma and changed the fate of patients and their families. Ophthalmic genetics 43 (6) (2023)
Kevin Stachelek, Narine Harutyunyan, Susan Lee, Assaf Beck, Jonathan Kim, Liya Xu, Jesse L Berry, Aaron Nagiel, C Patrick Reynolds, A Linn Murphree, Thomas C Lee, Jennifer G Aparicio, David Cobrinik
Non-synonymous, synonymous, and non-coding nucleotide variants contribute to recurrently altered biological processes during retinoblastoma progression. Genes, chromosomes & cancer 62 (5) (2023)
Kevin Stachelek, Narine Harutyunyan, Susan Lee, Assaf Beck, Jonathan Kim, Liya Xu, Jesse L Berry, Aaron Nagiel, C Patrick Reynolds, A Linn Murphree, Thomas C Lee, Jennifer G Aparicio, David Cobrinik
Non-synonymous, synonymous, and non-coding nucleotide variants contribute to recurrently altered biological processes during retinoblastoma progression. Genes, chromosomes & cancer 62 (5) (2023)
Jesse L Berry, Elias I Traboulsi, Francis L Munier
A. Linn Murphree, MD: the Mississippi man who conquered retinoblastoma and changed the fate of patients and their families. Ophthalmic genetics 43 (6) (2023)
Kevin Stachelek, Narine Harutyunyan, Susan Lee, Assaf Beck, Jonathan Kim, Liya Xu, Jesse L Berry, Aaron Nagiel, C Patrick Reynolds, A Linn Murphree, Thomas C Lee, Jennifer G Aparicio, David Cobrinik
Non-synonymous, synonymous, and non-coding nucleotide variants contribute to recurrently altered biological processes during retinoblastoma progression. Genes, chromosomes & cancer 62 (5) (2023)
Michael J Schmidt, Rishvanth K Prabakar, Sarah Pike, Venkata Yellapantula, Chen-Ching Peng, Peter Kuhn, James B Hicks, Liya Xu, Jesse L Berry
Simultaneous Copy Number Alteration and Single-Nucleotide Variation Analysis in Matched Aqueous Humor and Tumor Samples in Children with Retinoblastoma. International journal of molecular sciences 24 (10) (2023)
Chen-Ching Peng, Shreya Sirivolu, Sarah Pike, Mary E Kim, Bibiana Reiser, Hong-Tao Li, Gangning Liang, Liya Xu, Jesse L Berry
Diagnostic Aqueous Humor Proteome Predicts Metastatic Potential in Uveal Melanoma. International journal of molecular sciences 24 (7) (2023)
Chen-Ching Peng, Deborah H Im, Shreya Sirivolu, Bibiana Reiser, Aaron Nagiel, Paolo Neviani, Liya Xu, Jesse L Berry
Single vesicle analysis of aqueous humor in pediatric ocular diseases reveals eye specific CD63-dominant subpopulations. Journal of extracellular biology 1 (4) (2022)
Sarah Pike, Rahul Iyengar, Chen-Ching Peng, Patricia Chevez-Barrios, Brianne Brown, Rachana Shah, Jaclyn Biegel, Venkata Yellapantula, Aaron Nagiel, Bibiana Jin Reiser, Liya Xu, Jesse L Berry
Malignant teratoid intraocular ciliary body medulloepithelioma in a 5-year-old male with corresponding somatic copy number alteration profile of aqueous humor cell-free DNA. Ophthalmic genetics (2022)
Deborah H Im, Chen-Ching Peng, Liya Xu, Mary E Kim, Dejerianne Ostrow, Venkata Yellapantula, Moiz Bootwalla, Jaclyn A Biegel, Xiaowu Gai, Rishvanth K Prabakar, Peter Kuhn, James B Hicks, Jesse L Berry
Potential of Aqueous Humor as a Liquid Biopsy for Uveal Melanoma. International journal of molecular sciences 23 (11) (2022)
Hong-Tao Li, Liya Xu, Daniel J Weisenberger, Meng Li, Wanding Zhou, Chen-Ching Peng, Kevin Stachelek, David Cobrinik, Gangning Liang, Jesse L Berry
Characterizing DNA methylation signatures of retinoblastoma using aqueous humor liquid biopsy. Nature communications 13 (1) (2022)
Thamanna Nishath, Xiudi Li, Arthika Chandramohan, Megan Othus, Xunda Ji, Yihua Zou, Sadia Sultana, Riffat Rashid, Sadik Taju Sherief, Nathalie Cassoux, Juan Luis Garcia Leon, Rosdali Díaz Coronado, Arturo Manuel Zapata López, Tatiana L Ushakova, Vladimir G Polyakov, Soma Rani Roy, Alia Ahmad, Ashwin Reddy, Mandeep S Sagoo, Lamis Al Harby, Jonathan W Kim, Jesse L Berry, Ashley Polski, Nicholas J Astbury, Cova Bascaran, Sharon Blum, Richard J C Bowman, Matthew J Burton, Allen Foster, Nir Gomel, Naama Keren-Froim, Shiran Madgar, Marcia Zondervan, Srikanta Kumar Padhy, Ido Didi Fabian, Andrew W Stacey
Risk factors associated with abandonment of care in retinoblastoma: analysis of 692 patients from 10 countries. The British journal of ophthalmology (2022)
Kevin Stachelek, Narine Harutyunyan, Susan Lee, Assaf Beck, Jonathan Kim, Liya Xu, Jesse L Berry, Aaron Nagiel, C Patrick Reynolds, A Linn Murphree, Thomas C Lee, Jennifer G Aparicio, David Cobrinik
Non-synonymous, synonymous, and non-coding nucleotide variants contribute to recurrently altered biological processes during retinoblastoma progression. Genes, chromosomes & cancer (2022)
Mary E Kim, Jesse L Berry, Liya Xu, Rishvanth K Prabakar, Chen-Ching Peng, Mark William Reid, Rachana Shah, Peter Kuhn, David Cobrinik, James Hicks, Jesse L Berry
Comprehensive Somatic Copy Number Analysis Using Aqueous Humor Liquid Biopsy for Retinoblastoma. Cancers 13 (13) (2021)
Liya Xu, Mary E Kim, Jesse L Berry, Rishvanth K Prabakar, Lishuang Shen, Chen-Ching Peng, Mark William Reid, Patricia Chévez-Barrios, Jonathan W Kim, Rachana Shah, Rima Jubran, Peter Kuhn, David Cobrinik, Jaclyn A Biegel, Xiaowu Gai, James Hicks, Jesse L Berry
Establishing the Clinical Utility of ctDNA Analysis for Diagnosis, Prognosis, and Treatment Monitoring of Retinoblastoma: The Aqueous Humor Liquid Biopsy. Cancers 13 (6) (2021)
Elyssa Y Wong, Liya Xu, Lishuang Shen, Mary E Kim, Ashley Polski, Rishvanth K Prabakar, Rachana Shah, Rima Jubran, Jonathan W Kim, Jaclyn A Biegel, Xiaowu Gai, Peter Kuhn, James Hicks, Jesse L Berry
Inter-eye genomic heterogeneity in bilateral retinoblastoma via aqueous humor liquid biopsy. NPJ precision oncology 5 (1) (2021)
Jesse L Berry, Francis L Munier, Brenda L Gallie, Jesse L Berry, Sona Shah, Carol L Shields, Dan S Gombos, Kathleen Ruchalski, Christina Stathopoulos, Rachana Shah, Rima F Jubran, Jonathan W Kim, Prithvi Mruthyunjaya, Brian P Marr, Matthew W Wilson, Rachel C Brennan, Guillermo L Chantada, Murali M Chintagumpala, A Linn Murphree
Response criteria for intraocular retinoblastoma: RB-RECIST. Pediatric blood & cancer 68 (5) (2021)
Srikanta Kumar Padhy, Xunda Ji, Yihua Zou, Riffat Rashid, Sadia Sultana, Sadik Taju Sherief, Nathalie Cassoux, Rosdali Diaz Coronado, Juan Luis Garcia Leon, Arturo Manuel Zapata López, Vladimir G Polyakov, Tatiana L Ushakova, Soma Rani Roy, Alia Ahmad, Lamis Al Harby, M Ashwin Reddy, Mandeep S Sagoo, Jesse L Berry, Jonathan Kim, Jesse L Berry, Nicholas J Astbury, Covadonga Bascaran, Sharon Blum, Richard Bowman, Matthew J Burton, Allen Foster, Nir Gomel, Naama Keren-Froim, Shiran Madgar, Andrew W Stacey, David M Steinberg, Ashik Mohamed, Marcia Zondervan, Ido Didi Fabian
Lag Time between Onset of First Symptom and Treatment of Retinoblastoma: An International Collaborative Study of 692 Patients from 10 Countries. Cancers 13 (8) (2021)
Ankit Singh Tomar, Paul T Finger, Brenda Gallie, Tero Kivelä, Ashwin Mallipatna, Chengyue Zhang, Junyang Zhao, Matthew Wilson, Rachel C Brennan, Michala Burges, Jonathan Kim, Jesse L Berry, Rima Jubran, Vikas Khetan, Suganeswari Ganeshan, Andrey Yarovoy, Vera Yarovaya, Elena Kotova, Denis Volodin, Yacoub A Yousef, Kalle Nummi, Tatiana L Ushakova, Olga V Yugay, Vladimir G Polyakov, Marco Antonio Ramirez-Ortiz, Elizabeth Esparza-Aguiar, Guillermo L Chantada, Paula Schaiquevich, Adriana C Fandiño, Jason C S Yam, Winnie W Lau, Carol P Lam, Phillipa Sharwood, Sonia Moorthy, Quah Boon Long, Vera Adobea Essuman, Lorna A Renner, Ekaterina Semenova, Jaume Català-Mora, Maria Correa Llano, Elisa Carreras, null null, null null
Retinoblastoma seeds: impact on American Joint Committee on Cancer clinical staging. The British journal of ophthalmology (2021)
Liya Xu, Jesse L Berry, Rishvanth K Prabakar, Mark William Reid, Patricia Chevez-Barrios, Rima Jubran, Jonathan W Kim, Peter Kuhn, David Cobrinik, James B Hicks, Jesse L Berry
Chromosome 6p Amplification in Aqueous Humor Cell-Free DNA Is a Prognostic Biomarker for Retinoblastoma Ocular Survival. Molecular cancer research : MCR 18 (8) (2020)
Jesse L Berry, Jesse L Berry, Webster K Cavenee, Thaddeus P Dryja, A Linn Murphree, Brenda L Gallie
The RB1 Story: Characterization and Cloning of the First Tumor Suppressor Gene. Genes 10 (11) (2019)
Harini V Gudiseva, Jesse L Berry, Jesse L Berry, Santa J Tummina, Joan M O'Brien
Next-Generation Technologies and Strategies for the Management of Retinoblastoma. Genes 10 (12) (2019)
Jesse L Berry, Liya Xu, Irsan Kooi, A Linn Murphree, Rishvanth K Prabakar, Mark Reid, Kevin Stachelek, Bao Han A Le, Lisa Welter, Bibiana J Reiser, Patricia Chévez-Barrios, Rima Jubran, Thomas C Lee, Jonathan W Kim, Peter Kuhn, David Cobrinik, James Hicks
Genomic cfDNA Analysis of Aqueous Humor in Retinoblastoma Predicts Eye Salvage: The Surrogate Tumor Biopsy for Retinoblastoma. Molecular cancer research : MCR 16 (11) (2018)
Jesse L Berry, Kaitlin Kogachi, Rima Jubran, Jonathan W Kim
Loss of fundus view as an indication for secondary enucleation in retinoblastoma. Pediatric blood & cancer 65 (4) (2017)
Jesse L Berry, Sona Shah, Mercy Bechtold, Emily Zolfaghari, Rima Jubran, Jonathan W Kim
Long-term outcomes of Group D retinoblastoma eyes during the intravitreal melphalan era. Pediatric blood & cancer 64 (12) (2017)