Joachim Kopka

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2023
Publications (10 Years): 31

Top Topics

Gas Chromatography Mass Spectrometry

Arabidopsis Thaliana

Transcription Factor

Top Venues

Plant physiology

International journal of molecular sciences

Scientific reports

This page only lists publications with an associated author ORCID identifier.

Publications

Anna Siodmak, Federico Martinez-Seidel, Naganand Rayapuram, Jeremie Bazin, Hanna Alhoraibi, Dione Gentry-Torfer, Naheed Tabassum, Arsheed H Sheikh, José Kenyi González Kise, Ikram Blilou, Martin Crespi, Joachim Kopka, Heribert Hirt
Dynamics of ribosome composition and ribosomal protein phosphorylation in immune signaling in Arabidopsis thaliana. Nucleic acids research (2023)
Sara Rosa-Téllez, Andrea Alcántara-Enguídanos, Federico Martinez-Seidel, Ruben Casatejada-Anchel, Sompop Saeheng, Clayton L Bailes, Alexander Erban, David Barbosa Medeiros, Paula Alepúz, José Tomás Matus, Joachim Kopka, Jesús Muñoz-Bertomeu, Stephan Krueger, Sanja Roje, Alisdair Robert Fernie, Roc Ros
The serine-glycine-one carbon metabolic network orchestrates changes in nitrogen and sulfur metabolism and shapes plant development. The Plant cell (2023)
Kora Vyse, Stephanie Schaarschmidt, Alexander Erban, Joachim Kopka, Ellen Zuther
Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory. Physiologia plantarum 174 (4) (2022)
Yulei Zhao, Nisha Agrawal, Hassan Ghareeb, Mohammad Tanbir Habib, Sascha Dickmeis, Jens Schwachtje, Tim E Iven, Joachim Kopka, Ivo Doe Feussner, Jan Schirawski
The Sporisorium reilianum Effector Vag2 Promotes Head Smut Disease via Suppression of Plant Defense Responses. Journal of fungi (Basel, Switzerland) 8 (5) (2022)
Marcin Luzarowski, Rubén Vicente, Andrei Kiselev, Mateusz Wagner, Dennis Schlossarek, Alexander Erban, Leonardo Perez de Souza, Dorothee Childs, Izabela Wojciechowska, Urszula Luzarowska, Michał Górka, Ewelina M Sokołowska, Monika Kosmacz, Juan C Moreno, Aleksandra Brzezińska, Bhavana Vegesna, Joachim Kopka, Alisdair Robert Fernie, Lothar Willmitzer, Jennifer C Ewald, Aleksandra Skirycz
Global mapping of protein-metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity. Communications biology 4 (1) (2021)
Amira Susana Nieva, Fernando Matías Romero, Alexander Erban, Pedro Carrasco, Oscar Adolfo Ruiz, Joachim Kopka
Metabolic Profiling and Metabolite Correlation Network Analysis Reveal That Fusarium solani Induces Differential Metabolic Responses in Lotus japonicus and Lotus tenuis against Severe Phosphate Starvation. Journal of fungi (Basel, Switzerland) 7 (9) (2021)
Christina Schumacher, Christoph Tim Krannich, Lisa Maletzki, Karin Köhl, Joachim Kopka, Heike Sprenger, Dirk Karl Hincha, Sylvia Seddig, Rolf Peters, Sadia Hamera, Ellen Zuther, Manuela Haas, Renate Horn
Unravelling Differences in Candidate Genes for Drought Tolerance in Potato (Solanum tuberosum L.) by Use of New Functional Microsatellite Markers. Genes 12 (4) (2021)
Stephanie Schaarschmidt, Ulrike Glaubitz, Alexander Erban, Joachim Kopka, Ellen Zuther
Differentiation of the High Night Temperature Response in Leaf Segments of Rice Cultivars with Contrasting Tolerance. International journal of molecular sciences 22 (19) (2021)
Orarat Ginsawaeng, Michal Gorka, Alexander Erban, Carolin Heise, Franziska Brueckner, Rainer Hoefgen, Joachim Kopka, Aleksandra Skirycz, Dirk Karl Hincha, Ellen Zuther
Characterization of the Heat-Stable Proteome during Seed Germination in Arabidopsis with Special Focus on LEA Proteins. International journal of molecular sciences 22 (15) (2021)
Sara Tedesco, Alexander Erban, Saurabh Gupta, Joachim Kopka, Pedro Fevereiro, Friedrich Kragler, Ana Pina
The Impact of Metabolic Scion-Rootstock Interactions in Different Grapevine Tissues and Phloem Exudates. Metabolites 11 (6) (2021)
Christina Schumacher, Susanne Thümecke, Florian Schilling, Karin Köhl, Joachim Kopka, Heike Sprenger, Dirk Karl Hincha, Dirk Walther, Sylvia Seddig, Rolf Peters, Ellen Zuther, Manuela Haas, Renate Horn
Genome-Wide Approach to Identify Quantitative Trait Loci for Drought Tolerance in Tetraploid Potato (Solanum tuberosum L.). International journal of molecular sciences 22 (11) (2021)
Federico Martinez-Seidel, Olga Beine-Golovchuk, Yin-Chen Hsieh, Kheloud El Eshraky, Michal Gorka, Bo-Eng Cheong, Erika V Jimenez-Posada, Dirk Walther, Aleksandra Skirycz, Ute Roessner, Joachim Kopka, Alexandre Augusto Pereira Firmino
Spatially Enriched Paralog Rearrangements Argue Functionally Diverse Ribosomes Arise during Cold Acclimation in Arabidopsis. International journal of molecular sciences 22 (11) (2021)
Haim Treves, Anika Küken, Stéphanie Arrivault, Hirofumi Ishihara, Ines Hoppe, Alexander Erban, Melanie Höhne, Thiago Alexandre Moraes, Joachim Kopka, Jedrzej Jakub Szymanski, Zoran Nikoloski, Mark Stitt
Carbon flux through photosynthesis and central carbon metabolism show distinct patterns between algae, C 3 and C 4 plants. Nature plants 8 (1) (2021)
Stephanie Schaarschmidt, Lovely Mae F Lawas, Joachim Kopka, S V Krishna Jagadish, Ellen Zuther
Physiological and molecular attributes contribute to high night temperature tolerance in cereals. Plant, cell & environment 44 (7) (2021)
Shreya Agrawal, Daniel Karcher, Stephanie Ruf, Alexander Erban, Alexander P Hertle, Joachim Kopka, Ralph Bock
Riboswitch-mediated inducible expression of an astaxanthin biosynthetic operon in plastids. Plant physiology (2021)
Diana Pimentel, Rute Amaro, Alexander Erban, Nuria Mauri, Flávio Soares, Cecília Rego, José M Martínez-Zapater, Axel Mithöfer, Joachim Kopka, Ana Margarida Fortes
Transcriptional, hormonal, and metabolic changes in susceptible grape berries under powdery mildew infection. Journal of experimental botany 72 (18) (2021)
Valéria F Lima, Alexander Erban, André Guilherme Daubermann, Francisco Bruno S Freire, Nicole P Porto, Silvio A Cândido-Sobrinho, David Barbosa Medeiros, Markus Schwarzländer, Alisdair Robert Fernie, Letícia Dos Anjos, Joachim Kopka, Danilo M Daloso
Establishment of a GC-MS-based 13 C-positional isotopomer approach suitable for investigating metabolic fluxes in plant primary metabolism. The Plant journal : for cell and molecular biology 108 (4) (2021)
Charles Ar Cotton, Iria Bernhardsgrütter, Hai He, Simon Burgener, Luca Schulz, Nicole Paczia, Beau Dronsella, Alexander Erban, Stepan Toman, Marian Dempfle, Alberto De Maria, Joachim Kopka, Steffen N Lindner, Tobias J Erb, Arren Bar-Even
Underground isoleucine biosynthesis pathways in E. coli. eLife 9 (2020)
Ioannis F Kalampokis, Alexander Erban, Sotirios Amillis, George Diallinas, Joachim Kopka, Konstantinos A Aliferis
Untargeted metabolomics as a hypothesis-generation tool in plant protection product discovery: Highlighting the potential of trehalose and glycerol metabolism of fungal conidiospores as novel targets. Metabolomics : Official journal of the Metabolomic Society 16 (7) (2020)
Alexandre Augusto Pereira Firmino, Michal Gorka, Alexander Graf, Aleksandra Skirycz, Federico Martinez-Seidel, Kerstin Zander, Joachim Kopka, Olga Beine-Golovchuk
Separation and Paired Proteome Profiling of Plant Chloroplast and Cytoplasmic Ribosomes. Plants (Basel, Switzerland) 9 (7) (2020)
Haim Treves, Beata Siemiatkowska, Urszula Luzarowska, Omer Murik, Noe Fernandez-Pozo, Thiago Alexandre Moraes, Alexander Erban, Ute Armbruster, Yariv Brotman, Joachim Kopka, Stefan Andreas Rensing, Jedrzej Jakub Szymanski, Mark Stitt
Multi-omics reveals mechanisms of total resistance to extreme illumination of a desert alga. Nature plants 6 (8) (2020)
Alexander Erban, Ines Fehrle, Federico Martinez-Seidel, Federico Brigante, Agustín Lucini Más, Veronica Baroni, Daniel Wunderlin, Joachim Kopka
Discovery of food identity markers by metabolomics and machine learning technology. Scientific reports 9 (1) (2019)
Armarego-Marriott Tegan, Łucja Kowalewska, Asdrubal Burgos, Axel Fischer, Wolfram Thiele, Alexander Erban, Deserah Strand, Sabine Kahlau, Alexander Hertle, Joachim Kopka, Dirk Walther, Ziv Reich, Mark Aurel Schöttler, Ralph Bock
Highly Resolved Systems Biology to Dissect the Etioplast-to-Chloroplast Transition in Tobacco Leaves. Plant physiology 180 (1) (2019)
Andrew D Hanson, Julian M Hibberd, Mattheos A G Koffas, Joachim Kopka, Eleanore T Wurtzel
Focus Issue Editorial: Synthetic Biology. Plant physiology 179 (3) (2019)
Daisuke Takahashi, Michal Gorka, Alexander Erban, Alexander Graf, Joachim Kopka, Ellen Zuther, Dirk Karl Hincha
Both cold and sub-zero acclimation induce cell wall modification and changes in the extracellular proteome in Arabidopsis thaliana. Scientific reports 9 (1) (2019)
Olga Beine-Golovchuk, Alexandre Augusto Pereira Firmino, Adrianna Dabrowska, Stefanie Schmidt, Alexander Erban, Dirk Walther, Ellen Zuther, Dirk K Hincha, Joachim Kopka
Plant Temperature Acclimation and Growth Rely on Cytosolic Ribosome Biogenesis Factor Homologs. Plant physiology 176 (3) (2018)
Daniel Geuss, Tobias Lortzing, Jens Schwachtje, Joachim Kopka, Anke Steppuhn
Oviposition by Spodoptera exigua on Solanum dulcamara Alters the Plant's Response to Herbivory and Impairs Larval Performance. International journal of molecular sciences 19 (12) (2018)
Kostadin E Atanasov, Changxin Liu, Alexander Erban, Joachim Kopka, Jane E Parker, Rubén Alcázar
NLR Mutations Suppressing Immune Hybrid Incompatibility and Their Effects on Disease Resistance. Plant physiology 177 (3) (2018)
Jens Schwachtje, Axel Fischer, Alexander Erban, Joachim Kopka
Primed primary metabolism in systemic leaves: a functional systems analysis. Scientific reports 8 (1) (2018)
Frederik Dethloff, Isabel Orf, Joachim Kopka
Rapid in situ 13C tracing of sucrose utilization in Arabidopsis sink and source leaves. Plant methods 13 (2017)
Isabel Orf, Stefan Timm, Hermann Bauwe, Alisdair R Fernie, Martin Hagemann, Joachim Kopka, Zoran Nikoloski
Can cyanobacteria serve as a model of plant photorespiration? - a comparative meta-analysis of metabolite profiles. Journal of experimental botany 67 (10) (2016)
Isabel Orf, Stephan Klähn, Doreen Schwarz, Marcus Frank, Wolfgang R Hess, Martin Hagemann, Joachim Kopka
Integrated Analysis of Engineered Carbon Limitation in a Quadruple CO2/HCO3- Uptake Mutant of Synechocystis sp. PCC 6803. Plant physiology 169 (3) (2015)