Jonathan Richard Church (Jonathan R Church, Jonathan Church)

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 10

Top Topics

Molecular Dynamics Simulations

Top Venues

Journal of chemical information and modeling

Chemistry (Weinheim an der Bergstrasse, Germany)

Science (New York, N.Y.)

Nature structural & molecular biology

This page only lists publications with an associated author ORCID identifier.

Publications

Meitar Sela, Jonathan Richard Church, Igor Schapiro, Dina Schneidman-Duhovny
RhoMax: Computational Prediction of Rhodopsin Absorption Maxima Using Geometric Deep Learning. Journal of chemical information and modeling (2024)
Meitar Sela, Jonathan Richard Church, Igor Schapiro, Dina Schneidman-Duhovny
RhoMax: Computational Prediction of Rhodopsin Absorption Maxima Using Geometric Deep Learning. Journal of chemical information and modeling 64 (12) (2024)
Meitar Sela, Jonathan Richard Church, Igor Schapiro, Dina Schneidman-Duhovny
RhoMax: Computational Prediction of Rhodopsin Absorption Maxima Using Geometric Deep Learning. Journal of chemical information and modeling 64 (12) (2024)
Meitar Sela, Jonathan Richard Church, Igor Schapiro, Dina Schneidman-Duhovny
RhoMax: Computational Prediction of Rhodopsin Absorption Maxima Using Geometric Deep Learning. Journal of chemical information and modeling 64 (12) (2024)
Giovanni Li Manni, Ignacio Fdez Galván, Ali Alavi, Flavia Aleotti, Francesco Aquilante, Jochen Autschbach, Davide Avagliano, Alberto Baiardi, Jie J Bao, Stefano Battaglia, Letitia Birnoschi, Alejandro Blanco-González, Sergey I Bokarev, Ria Broer, Roberto Cacciari, Paul B Calio, Rebecca K Carlson, Rafael C Couto, Luis Cerdán, Liviu F Chibotaru, Nicholas F Chilton, Jonathan Richard Church, Irene Conti, Sonia Coriani, Juliana Cuéllar-Zuquin, Razan E Daoud, Nike Dattani, Piero Decleva, Coen de Graaf, Mickaël G Delcey, Luca De Vico, Werner Dobrautz, Sijia S Dong, Rulin Feng, Nicolas Ferré, Michael Filatov Gulak, Soumen Ghosh, Marco Garavelli, Leticia González, Yafu Guan, Meiyuan Guo, Matthew R Hennefarth, Matthew R Hermes, Chad E Hoyer, Miquel Huix-Rotllant, Vishal Kumar Jaiswal, Andy Kaiser, Danil S Kaliakin, Marjan Khamesian, Daniel S King, Vladislav Kochetov, Marek Krośnicki, Arpit Arun Kumaar, Ernst Dennis Larsson, Susi Lehtola, Marie-Bernadette Lepetit, Hans Lischka, Pablo López Ríos, Marcus Lundberg, Dongxia Ma, Sebastian Mai, Philipp Marquetand, Isabella C D Merritt, Francesco Montorsi, Maximilian Mörchen, Artur Nenov, Vu Ha Anh Nguyen, Yoshio Nishimoto, Meagan S Oakley, Massimo Olivucci, Markus Oppel, Daniele Padula, Riddhish Pandharkar, Quan Manh Phung, Felix Plasser, Gerardo Raggi, Elisa Rebolini, Markus Reiher, Ivan Rivalta, Daniel Roca-Sanjuán, Thies Romig, Arta Anushirwan Safari, Aitor Sánchez-Mansilla, Andrew M Sand, Igor Schapiro, Thais R Scott, Javier Segarra-Marti, Francesco Segatta, Dumitru-Claudiu Sergentu, Prachi Sharma, Ron Shepard, Yinan Shu, Jakob K Staab, Tjerk P Straatsma, Lasse Kragh Sørensen, Bruno Nunes Cabral Tenorio, Donald G Truhlar, Liviu Ungur, Morgane Vacher, Valera Veryazov, Torben Arne Voß, Oskar Weser, Dihua Wu, Xuchun Yang, David R Yarkony, Chen Zhou, J Patrick Zobel, Roland Lindh
The OpenMolcas Web : A Community-Driven Approach to Advancing Computational Chemistry. Journal of chemical theory and computation (2023)
Julius Gemen, Jonathan Richard Church, Tero-Petri Ruoko, Nikita A Durandin, Michał J Białek, Maren Weißenfels, Moran Feller, Miri Kazes, Magdalena Odaybat, Veniamin A Borin, Rishir Kalepu, Yael Diskin-Posner, Dan Oron, Matthew John Fuchter, Arri Priimägi, Igor Schapiro, Rafal Klajn
Disequilibrating azobenzenes by visible-light sensitization under confinement. Science (New York, N.Y.) 381 (6664) (2023)
Andrey Rozenberg, Igor Kaczmarczyk, Donna Matzov, Johannes Vierock, Takashi Nagata, Masahiro Sugiura, Kota Katayama, Yuma Kawasaki, Masae Konno, Yujiro Nagasaka, Mako Aoyama, Ishita Das, Efrat Pahima, Jonathan Richard Church, Suliman Adam, Veniamin A Borin, Ariel Chazan, Sandra Augustin, Jonas Wietek, Julien Dine, Yoav Peleg, Akira Kawanabe, Yuichiro Fujiwara, Ofer Yizhar, Mordechai Sheves, Igor Schapiro, Yuji Furutani, Hideki Kandori, Keiichi Inoue, Peter Hegemann, Oded Béjà, Moran Shalev-Benami
Rhodopsin-bestrophin fusion proteins from unicellular algae form gigantic pentameric ion channels. Nature structural & molecular biology 29 (6) (2022)
Jonathan Richard Church, Gil S Amoyal, Veniamin A Borin, Suliman Adam, Jógvan Magnus Haugaard Olsen, Igor Schapiro
Deciphering the Spectral Tuning Mechanism in Proteorhodopsin: The Dominant Role of Electrostatics Instead of Chromophore Geometry. Chemistry (Weinheim an der Bergstrasse, Germany) 28 (28) (2022)
Jonathan Richard Church, Jógvan Magnus Haugaard Olsen, Igor Schapiro
The Impact of Retinal Configuration on the Protein-Chromophore Interactions in Bistable Jumping Spider Rhodopsin-1. Molecules (Basel, Switzerland) 27 (1) (2021)
Maria-Andrea Mroginski, Suliman Adam, Gil S Amoyal, Avishai Barnoy, Ana-Nicoleta Bondar, Veniamin A Borin, Jonathan Richard Church, Tatiana Domratcheva, Bernd Ensing, Francesca Fanelli, Nicolas Ferré, Ofer Filiba, Laura Pedraza-González, Ronald González, Cristina E González-Espinoza, Rajiv Kumar Kar, Lukas Kemmler, Seung Soo Kim, Jacob Kongsted, Anna I Krylov, Yigal Lahav, Michalis Lazaratos, Qays NasserEddin, Isabelle Navizet, Alexander V Nemukhin, Massimo Olivucci, Jógvan Magnus Haugaard Olsen, Alberto Pérez de Alba Ortíz, Elisa Pieri, Aditya G Rao, Young Min Rhee, Niccolò Ricardi, Saumik Sen, Ilia A Solov'yov, Luca De Vico, Tomasz Adam Wesołowski, Christian Wiebeler, Xuchun Yang, Igor Schapiro
Frontiers in Multiscale Modeling of Photoreceptor Proteins. Photochemistry and photobiology 97 (2) (2021)