Julio Collado-Vides

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 8

Top Venues

bioRxiv : the preprint server for biology

Nature reviews. Genetics

Nucleic acids research

Universidad Nacional Autónoma de México

Universidad Nacional Autónoma de México (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Universidad Nacional Autónoma de México

Mexico

Head of the Program of Computational Biology :: Center for Genomic Sciences

Boston University Aug 01 2018

United States

Research Adjunct Professor :: Biomedical Engineering

Education History

Universidad Nacional Autónoma de México

Mexico

PHD :: Biomedical Research Institute, UACPyP

National Autonomous University of Mexico

Mexico

MSC :: School of Chemistry

Universidad Nacional Autónoma de México

Mexico

MSC :: Institute of Biomedical Research, UACPyP

Publications

Patrick Lally, Laura Gomez-Romero, Víctor H Tierrafría, Patricia Aquino, Claire Rioualen, Xiaoman Zhang, Sunyoung Kim, Gabriele Baniulyte, Jonathan Plitnick, Carol Smith, Mohan Babu, Julio Collado-Vides, Joseph T Wade, James E Galagan
Predictive Biophysical Neural Network Modeling of a Compendium of in vivo Transcription Factor DNA Binding Profiles for Escherichia coli . bioRxiv : the preprint server for biology (2024)
Patrick Lally, Laura Gomez-Romero, Víctor H Tierrafría, Patricia Aquino, Claire Rioualen, Xiaoman Zhang, Sunyoung Kim, Gabriele Baniulyte, Jonathan Plitnick, Carol Smith, Mohan Babu, Julio Collado-Vides, Joseph T Wade, James E Galagan
Predictive Biophysical Neural Network Modeling of a Compendium of in vivo Transcription Factor DNA Binding Profiles for Escherichia coli . bioRxiv : the preprint server for biology (2024)
Patrick Lally, Laura Gomez-Romero, Víctor H Tierrafría, Patricia Aquino, Claire Rioualen, Xiaoman Zhang, Sunyoung Kim, Gabriele Baniulyte, Jonathan Plitnick, Carol Smith, Mohan Babu, Julio Collado-Vides, Joseph T Wade, James E Galagan
Predictive Biophysical Neural Network Modeling of a Compendium of in vivo Transcription Factor DNA Binding Profiles for Escherichia coli . bioRxiv : the preprint server for biology (2024)
Heladia Salgado, Socorro Gama-Castro, Paloma Lara, Citlalli Mejia-Almonte, Gabriel Alarcón-Carranza, Andrés G López-Almazo, Felipe Betancourt-Figueroa, Pablo Peña-Loredo, Shirley Alquicira-Hernández, Daniela Ledezma-Tejeida, Lizeth Arizmendi-Zagal, Francisco Mendez-Hernandez, Ana K Diaz-Gomez, Elizabeth Ochoa-Praxedis, Luis J Muñiz-Rascado, Jair S García-Sotelo, Fanny A Flores-Gallegos, Laura Gómez, César Bonavides-Martínez, Víctor M Del Moral-Chávez, Alfredo J Hernández-Alvarez, Alberto Santos-Zavaleta, Salvador Capella, Josep Lluis Gelpí, Julio Collado-Vides
RegulonDB v12.0: a comprehensive resource of transcriptional regulation in E. coli K-12. Nucleic acids research (2023)
Paloma Lara, Socorro Gama-Castro, Heladia Salgado, Claire Rioualen, Luis J Muñiz-Rascado, Jair S García-Sotelo, Víctor H Tierrafría, Julio Collado-Vides
A Gold Standard for Transcription Factor-Gene Regulatory Interactions in Escherichia coli K-12: Architecture of the Evidence Types. bioRxiv : the preprint server for biology (2023)
Julio Collado-Vides
Regulatory promoter architectures in the hands of thermodynamic modelling. Nature reviews. Genetics (2023)
Paloma Lara, Socorro Gama-Castro, Heladia Salgado, Claire Rioualen, Luis J Muñiz-Rascado, Jair S García-Sotelo, Víctor H Tierrafría, Julio Collado-Vides
A Gold Standard for Transcription Factor-Gene Regulatory Interactions in Escherichia coli K-12: Architecture of the Evidence Types. bioRxiv : the preprint server for biology (2023)
Citlalli Mejía-Almonte, Stephen J W Busby, Joseph T Wade, Jacques van Helden, Adam Paul Arkin, Gary D Stormo, Karen Eilbeck, Bernhard O Palsson, James E Galagan, Julio Collado-Vides
Redefining fundamental concepts of transcription initiation in bacteria. Nature reviews. Genetics 21 (11) (2020)

Julio Collado-Vides.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Julio Collado-Vides