Jun Qu

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 49

Top Topics

Liquid Chromatography

Traumatic Brain Injury

Transcription Factor

Top Venues

International journal of molecular sciences

Analytical chemistry

Nature communications

Nature protocols

This page only lists publications with an associated author ORCID identifier.

Publications

Rama Dey-Rao, Shichen Shen, Jun Qu, Thomas Melendy
Proteomics Analysis of the Polyomavirus DNA Replication Initiation Complex Reveals Novel Functional Phosphorylated Residues and Associated Proteins. International journal of molecular sciences 25 (8) (2024)
Emma R Wilson, Gustavo Della-Flora Nunes, Shichen Shen, Seth Moore, Joseph Gawron, Jessica Maxwell, Umair Syed, Edward Hurley, Meghana Lanka, Jun Qu, Laurent Désaubry, Lawrence Wrabetz, Yannick Poitelon, Maria Laura Feltri
Loss of prohibitin 2 in Schwann cells dysregulates key transcription factors controlling developmental myelination. bioRxiv : the preprint server for biology (2024)
Qingqing Shen, Jie Pu, Chao Xue, Ming Zhang, Yang Qu, Shihan Huo, Michael Belford, Charles Maxey, Neloni Wijeratne, Claudia Martins, Scott Peterman, Wei-Jun Qian, Cornelia Boeser, Jun Qu
A Trapping-Micro-LC-FAIMS/dCV-MS Strategy for Ultrasensitive and Robust Targeted Quantification of Protein Drugs and Biomarkers. Analytical chemistry (2024)
Qingqing Shen, Jie Pu, Chao Xue, Ming Zhang, Yang Qu, Shihan Huo, Michael Belford, Charles Maxey, Neloni Wijeratne, Claudia Martins, Scott Peterman, Wei-Jun Qian, Cornelia Boeser, Jun Qu
A Trapping-Micro-LC-FAIMS/dCV-MS Strategy for Ultrasensitive and Robust Targeted Quantification of Protein Drugs and Biomarkers. Analytical chemistry 96 (32) (2024)
Rama Dey-Rao, Shichen Shen, Jun Qu, Thomas Melendy
Proteomics Analysis of the Polyomavirus DNA Replication Initiation Complex Reveals Novel Functional Phosphorylated Residues and Associated Proteins. International journal of molecular sciences 25 (8) (2024)
Rama Dey-Rao, Shichen Shen, Jun Qu, Thomas Melendy
Proteomics Analysis of the Polyomavirus DNA Replication Initiation Complex Reveals Novel Functional Phosphorylated Residues and Associated Proteins. International journal of molecular sciences 25 (8) (2024)
Rama Dey-Rao, Shichen Shen, Jun Qu, Thomas Melendy
Proteomics Analysis of the Polyomavirus DNA Replication Initiation Complex Reveals Novel Functional Phosphorylated Residues and Associated Proteins. International journal of molecular sciences 25 (8) (2024)
Emma R Wilson, Gustavo Della-Flora Nunes, Shichen Shen, Seth Moore, Joseph Gawron, Jessica Maxwell, Umair Syed, Edward Hurley, Meghana Lanka, Jun Qu, Laurent Désaubry, Lawrence Wrabetz, Yannick Poitelon, Maria Laura Feltri
Loss of prohibitin 2 in Schwann cells dysregulates key transcription factors controlling developmental myelination. bioRxiv : the preprint server for biology (2024)
Emma R Wilson, Gustavo Della-Flora Nunes, Shichen Shen, Seth Moore, Joseph Gawron, Jessica Maxwell, Umair Syed, Edward Hurley, Meghana Lanka, Jun Qu, Laurent Désaubry, Lawrence Wrabetz, Yannick Poitelon, Maria Laura Feltri
Loss of prohibitin 2 in Schwann cells dysregulates key transcription factors controlling developmental myelination. bioRxiv : the preprint server for biology (2024)
Shichen Shen, Chengjian Tu, He Shen, Jun Li, Costa Frangou, Jianmin Zhang, Jun Qu
Comparative Proteomics Analysis of Exosomes Identifies Key Pathways and Protein Markers Related to Breast Cancer Metastasis. International journal of molecular sciences 24 (4) (2023)
Sailee Rasam, Qingxiang Lin, Shichen Shen, Robert M Straubinger, Jun Qu
Highly Reproducible Quantitative Proteomics Analysis of Pancreatic Cancer Cells Reveals Proteome-Level Effects of a Novel Combination Drug Therapy That Induces Cancer Cell Death via Metabolic Remodeling and Activation of the Extrinsic Apoptosis Pathway. Journal of proteome research (2023)
Shichen Shen, Chengjian Tu, He Shen, Jun Li, Costa Frangou, Jianmin Zhang, Jun Qu
Comparative Proteomics Analysis of Exosomes Identifies Key Pathways and Protein Markers Related to Breast Cancer Metastasis. International journal of molecular sciences 24 (4) (2023)
Shichen Shen, Rebecca J Kapphahn, Ming Zhang, Shuo Qian, Sandra R Montezuma, Peng Shang, Deborah A Ferrington, Jun Qu
Quantitative Proteomics of Human Retinal Pigment Epithelium Reveals Key Regulators for the Pathogenesis of Age-Related Macular Degeneration. International journal of molecular sciences 24 (4) (2023)
Shichen Shen, Chengjian Tu, He Shen, Jun Li, Costa Frangou, Jianmin Zhang, Jun Qu
Comparative Proteomics Analysis of Exosomes Identifies Key Pathways and Protein Markers Related to Breast Cancer Metastasis. International journal of molecular sciences 24 (4) (2023)
Xue Wang, Jin Niu, Shuo Qian, Shichen Shen, Robert M Straubinger, Jun Qu
Species-Deconvolved Proteomics for In Situ Investigation of Tumor-Stroma Interactions after Treatment of Pancreatic Cancer Patient-Derived Xenografts with Combined Gemcitabine and Paclitaxel. Journal of proteome research (2023)
Shichen Shen, Rebecca J Kapphahn, Ming Zhang, Shuo Qian, Sandra R Montezuma, Peng Shang, Deborah A Ferrington, Jun Qu
Quantitative Proteomics of Human Retinal Pigment Epithelium Reveals Key Regulators for the Pathogenesis of Age-Related Macular Degeneration. International journal of molecular sciences 24 (4) (2023)
Shichen Shen, Chengjian Tu, He Shen, Jun Li, Costa Frangou, Jianmin Zhang, Jun Qu
Comparative Proteomics Analysis of Exosomes Identifies Key Pathways and Protein Markers Related to Breast Cancer Metastasis. International journal of molecular sciences 24 (4) (2023)
Shichen Shen, Chengjian Tu, He Shen, Jun Li, Costa Frangou, Jianmin Zhang, Jun Qu
Comparative Proteomics Analysis of Exosomes Identifies Key Pathways and Protein Markers Related to Breast Cancer Metastasis. International journal of molecular sciences 24 (4) (2023)
Shichen Shen, Rebecca J Kapphahn, Ming Zhang, Shuo Qian, Sandra R Montezuma, Peng Shang, Deborah A Ferrington, Jun Qu
Quantitative Proteomics of Human Retinal Pigment Epithelium Reveals Key Regulators for the Pathogenesis of Age-Related Macular Degeneration. International journal of molecular sciences 24 (4) (2023)
Shichen Shen, Chengjian Tu, He Shen, Jun Li, Costa Frangou, Jianmin Zhang, Jun Qu
Comparative Proteomics Analysis of Exosomes Identifies Key Pathways and Protein Markers Related to Breast Cancer Metastasis. International journal of molecular sciences 24 (4) (2023)
Mara C Ebeling, Cody R Fisher, Rebecca J Kapphahn, Madilyn R Stahl, Shichen Shen, Jun Qu, Sandra R Montezuma, Deborah A Ferrington
Inflammasome Activation in Retinal Pigment Epithelium from Human Donors with Age-Related Macular Degeneration. Cells 11 (13) (2022)
Min Ma, Shihan Huo, Ming Zhang, Shuo Qian, Xiaoyu Zhu, Jie Pu, Sailee Rasam, Chao Xue, Shichen Shen, Bo An, Jianmin Wang, Jun Qu
In-depth mapping of protein localizations in whole tissue by micro-scaffold assisted spatial proteomics (MASP). Nature communications 13 (1) (2022)
Jie Pu, Chao Xue, Shihan Huo, Qingqing Shen, Yang Qu, Xinxin Yang, Bo An, Thomas E Angel, Zhuo Chen, John T Mehl, Huaping Tang, Eric Yang, Timothy W Sikorski, Jun Qu
Highly Accurate and Robust Absolute Quantification of Target Proteins in Formalin-Fixed Paraffin-Embedded (FFPE) Tissues by LC-MS. Analytical chemistry 95 (2) (2022)
Min Ma, Shihan Huo, Ming Zhang, Shuo Qian, Xiaoyu Zhu, Jie Pu, Sailee Rasam, Chao Xue, Shichen Shen, Bo An, Jianmin Wang, Jun Qu
In-depth mapping of protein localizations in whole tissue by micro-scaffold assisted spatial proteomics (MASP). Nature communications 13 (1) (2022)
Shichen Shen, Xue Wang, Xiaoyu Zhu, Sailee Rasam, Min Ma, Shihan Huo, Shuo Qian, Ming Zhang, Miao Qu, Chenqi Hu, Liang Jin, Yu Tian, Sanjay Sethi, David J Poulsen, Jianmin Wang, Chengjian Tu, Jun Qu
High-quality and robust protein quantification in large clinical/pharmaceutical cohorts with IonStar proteomics investigation. Nature protocols 18 (3) (2022)
Shannon P Hilchey, Mukta G Palshikar, Eric S Mendelson, Shichen Shen, Sailee Rasam, Jason A Emo, Jun Qu, Juilee Thakar, Martin S Zand
Cyclosporine A Modulates LSP1 Protein Levels in Human B Cells to Attenuate B Cell Migration at Low O 2 Levels. Life (Basel, Switzerland) 12 (8) (2022)
Shichen Shen, Xue Wang, Xiaoyu Zhu, Sailee Rasam, Min Ma, Shihan Huo, Shuo Qian, Ming Zhang, Miao Qu, Chenqi Hu, Liang Jin, Yu Tian, Sanjay Sethi, David J Poulsen, Jianmin Wang, Chengjian Tu, Jun Qu
High-quality and robust protein quantification in large clinical/pharmaceutical cohorts with IonStar proteomics investigation. Nature protocols 18 (3) (2022)
Joshua J Wang, Karen Sophia Park, Narayan Dhimal, Shichen Shen, Xixiang Tang, Jun Qu, Sarah X Zhang
Proteomic Analysis of Retinal Mitochondria-Associated ER Membranes Identified Novel Proteins of Retinal Degeneration in Long-Term Diabetes. Cells 11 (18) (2022)
Manoj J Mammen, Chengjian Tu, Matthew C Morris, Spencer Richman, William Mangione, Zackary Falls, Jun Qu, Gordon Broderick, Sanjay Sethi, Ram Samudrala
Proteomic Network Analysis of Bronchoalveolar Lavage Fluid in Ex-Smokers to Discover Implicated Protein Targets and Novel Drug Treatments for Chronic Obstructive Pulmonary Disease. Pharmaceuticals (Basel, Switzerland) 15 (5) (2022)
Shichen Shen, Xue Wang, Xiaoyu Zhu, Sailee Rasam, Min Ma, Shihan Huo, Shuo Qian, Ming Zhang, Miao Qu, Chenqi Hu, Liang Jin, Yu Tian, Sanjay Sethi, David J Poulsen, Jianmin Wang, Chengjian Tu, Jun Qu
High-quality and robust protein quantification in large clinical/pharmaceutical cohorts with IonStar proteomics investigation. Nature protocols (2022)
Shichen Shen, Xue Wang, Xiaoyu Zhu, Sailee Rasam, Min Ma, Shihan Huo, Shuo Qian, Ming Zhang, Miao Qu, Chenqi Hu, Liang Jin, Yu Tian, Sanjay Sethi, David J Poulsen, Jianmin Wang, Chengjian Tu, Jun Qu
High-quality and robust protein quantification in large clinical/pharmaceutical cohorts with IonStar proteomics investigation. Nature protocols 18 (3) (2022)
Jie Pu, Chao Xue, Shihan Huo, Qingqing Shen, Yang Qu, Xinxin Yang, Bo An, Thomas E Angel, Zhuo Chen, John T Mehl, Huaping Tang, Eric Yang, Timothy W Sikorski, Jun Qu
Highly Accurate and Robust Absolute Quantification of Target Proteins in Formalin-Fixed Paraffin-Embedded (FFPE) Tissues by LC-MS. Analytical chemistry 95 (2) (2022)
Min Ma, Shihan Huo, Ming Zhang, Shuo Qian, Xiaoyu Zhu, Jie Pu, Sailee Rasam, Chao Xue, Shichen Shen, Bo An, Jianmin Wang, Jun Qu
In-depth mapping of protein localizations in whole tissue by micro-scaffold assisted spatial proteomics (MASP). Nature communications 13 (1) (2022)
Jie Pu, Chao Xue, Shihan Huo, Qingqing Shen, Yang Qu, Xinxin Yang, Bo An, Thomas E Angel, Zhuo Chen, John T Mehl, Huaping Tang, Eric Yang, Timothy W Sikorski, Jun Qu
Highly Accurate and Robust Absolute Quantification of Target Proteins in Formalin-Fixed Paraffin-Embedded (FFPE) Tissues by LC-MS. Analytical chemistry 95 (2) (2022)
Min Ma, Shihan Huo, Ming Zhang, Shuo Qian, Xiaoyu Zhu, Jie Pu, Sailee Rasam, Chao Xue, Shichen Shen, Bo An, Jianmin Wang, Jun Qu
In-depth mapping of protein localizations in whole tissue by micro-scaffold assisted spatial proteomics (MASP). Nature communications 13 (1) (2022)
Min Ma, Shihan Huo, Ming Zhang, Shuo Qian, Xiaoyu Zhu, Jie Pu, Sailee Rasam, Chao Xue, Shichen Shen, Bo An, Jianmin Wang, Jun Qu
In-depth mapping of protein localizations in whole tissue by micro-scaffold assisted spatial proteomics (MASP). Nature communications 13 (1) (2022)
Jie Pu, Chao Xue, Shihan Huo, Qingqing Shen, Yang Qu, Xinxin Yang, Bo An, Thomas E Angel, Zhuo Chen, John T Mehl, Huaping Tang, Eric Yang, Timothy W Sikorski, Jun Qu
Highly Accurate and Robust Absolute Quantification of Target Proteins in Formalin-Fixed Paraffin-Embedded (FFPE) Tissues by LC-MS. Analytical chemistry (2022)
Xue Wang, Liang Jin, Chenqi Hu, Shichen Shen, Shuo Qian, Min Ma, Xiaoyu Zhu, Fengzhi Li, Jianmin Wang, Yu Tian, Jun Qu
Ultra-High-Resolution IonStar Strategy Enhancing Accuracy and Precision of MS1-Based Proteomics and an Extensive Comparison with State-of-the-Art SWATH-MS in Large-Cohort Quantification. Analytical chemistry 93 (11) (2021)
Shichen Shen, Ming Zhang, Min Ma, Sailee Rasam, David J Poulsen, Jun Qu
Potential Neuroprotective Mechanisms of Methamphetamine Treatment in Traumatic Brain Injury Defined by Large-Scale IonStar-Based Quantitative Proteomics. International journal of molecular sciences 22 (5) (2021)
Shichen Shen, Jun Li, Shihan Huo, Min Ma, Xiaoyu Zhu, Sailee Rasam, Xiaotao Duan, Miao Qu, Mark A Titus, Jun Qu
Parallel, High-Quality Proteomic and Targeted Metabolomic Quantification Using Laser Capture Microdissected Tissues. Analytical chemistry 93 (25) (2021)
Amit Kumar, P Ross Wilderman, Chengjian Tu, Shichen Shen, Jun Qu, D Fernando Estrada
Evidence of Allosteric Coupling between Substrate Binding and Adx Recognition in the Vitamin D Carbon-24 Hydroxylase CYP24A1. Biochemistry 59 (15) (2020)
Bo An, Ming Zhang, Jie Pu, Yang Qu, Shichen Shen, Shaolian Zhou, Luca Ferrari, Faye Vazvaei, Jun Qu
Toward Accurate and Robust Liquid Chromatography-Mass Spectrometry-Based Quantification of Antibody Biotherapeutics in Tissues. Analytical chemistry 92 (22) (2020)
Bo An, Ming Zhang, Jie Pu, Shichen Shen, Yang Qu, Yuan-Ju Chen, Shihan Huo, Xue Wang, Joseph Ryan Polli, Joseph P Balthasar, Denis Herzog, Luca Ferrari, Roland F Staack, Wolfgang F Richter, Michael B Otteneder, Lisa J Benincosa, Shaolian Zhou, Faye Vazvaei, Jun Qu
High-Throughput, Sensitive LC-MS Quantification of Biotherapeutics and Biomarkers Using Antibody-Free, Peptide-Level, Multiple-Mechanism Enrichment via Strategic Regulation of pH and Ionic and Solvent Strengths. Analytical chemistry 91 (5) (2019)
Tamar B Cáceres, Abhishek Thakur, Owen M Price, Nicole Ippolito, Jun Li, Jun Qu, Orlando Acevedo, Joan M Hevel
Phe71 in Type III Trypanosomal Protein Arginine Methyltransferase 7 (TbPRMT7) Restricts the Enzyme to Monomethylation. Biochemistry 57 (8) (2018)
Ming Zhang, Bo An, Yang Qu, Shichen Shen, Wei Fu, Yuan-Ju Chen, Xue Wang, Rebeccah Young, John M Canty, Joseph P Balthasar, Keeley Murphy, Debadeep Bhattacharyya, Jonathan Josephs, Luca Ferrari, Shaolian Zhou, Surendra Bansal, Faye Vazvaei, Jun Qu
Sensitive, High-Throughput, and Robust Trapping-Micro-LC-MS Strategy for the Quantification of Biomarkers and Antibody Biotherapeutics. Analytical chemistry 90 (3) (2018)
Chengjian Tu, Michael V Fiandalo, Elena Pop, John J Stocking, Gissou Azabdaftari, Jun Li, Hua Wei, Danjun Ma, Jun Qu, James L Mohler, Li Tang, Yue Wu
Proteomic Analysis of Charcoal-Stripped Fetal Bovine Serum Reveals Changes in the Insulin-like Growth Factor Signaling Pathway. Journal of proteome research 17 (9) (2018)
Shichen Shen, Bo An, Xue Wang, Shannon P Hilchey, Jun Li, Jin Cao, Yu Tian, Chenqi Hu, Liang Jin, Andrew Ng, Chengjian Tu, Miao Qu, Martin S Zand, Jun Qu
Surfactant Cocktail-Aided Extraction/Precipitation/On-Pellet Digestion Strategy Enables Efficient and Reproducible Sample Preparation for Large-Scale Quantitative Proteomics. Analytical chemistry 90 (17) (2018)
Xiaomeng Shen, Shichen Shen, Jun Li, Qiang Hu, Lei Nie, Chengjian Tu, Xue Wang, Benjamin Orsburn, Jianmin Wang, Jun Qu
An IonStar Experimental Strategy for MS1 Ion Current-Based Quantification Using Ultrahigh-Field Orbitrap: Reproducible, In-Depth, and Accurate Protein Measurement in Large Cohorts. Journal of proteome research 16 (7) (2017)
Yulin Tian, Marco Paolo Jacinto, Yu Zeng, Zhipeng Yu, Jun Qu, Wenshe Ray Liu, Qing Lin
Genetically Encoded 2-Aryl-5-carboxytetrazoles for Site-Selective Protein Photo-Cross-Linking. Journal of the American Chemical Society 139 (17) (2017)