Kristoffer Sahlin

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 14

Top Topics

Respiratory Syndrome Coronavirus

Single Molecule

Clinical Evaluation

Top Venues

Genome research

Nature communications

Nature protocols

This page only lists publications with an associated author ORCID identifier.

Publications

Thomas Baudeau, Kristoffer Sahlin
Improved sub-genomic RNA prediction with the ARTIC protocol. Nucleic acids research (2024)
Barış Ekim, Kristoffer Sahlin, Paul Medvedev, Bonnie Berger, Rayan Chikhi
Efficient mapping of accurate long reads in minimizer space with mapquik. Genome research (2023)
Alexander J Petri, Kristoffer Sahlin
isONform: reference-free transcriptome reconstruction from Oxford Nanopore data. Bioinformatics (Oxford, England) 39 (39 Suppl 1) (2023)
Marta Tomaszkiewicz, Kristoffer Sahlin, Paul Medvedev, Kateryna D Makova
Transcript Isoform Diversity of Ampliconic Genes on the Y Chromosome of Great Apes. bioRxiv : the preprint server for biology (2023)
Benjamin Dominik Maier, Kristoffer Sahlin
Entropy predicts sensitivity of pseudo-random seeds. Genome research (2023)
Kristoffer Sahlin
Strobealign: flexible seed size enables ultra-fast and accurate read alignment. Genome biology 23 (1) (2022)
Aaron Pomerantz, Kristoffer Sahlin, Nina Vasiljevic, Adeline Seah, Marisa Lim, Emily Humble, Susan R Kennedy, Henrik Krehenwinkel, Sven Winter, Rob Ogden, Stefan Prost
Rapid in situ identification of biological specimens via DNA amplicon sequencing using miniaturized laboratory equipment. Nature protocols 17 (6) (2022)
Kristoffer Sahlin
Strobealign: flexible seed size enables ultra-fast and accurate read alignment. Genome biology 23 (1) (2022)
Kristoffer Sahlin
Strobealign: flexible seed size enables ultra-fast and accurate read alignment. Genome biology 23 (1) (2022)
Kristoffer Sahlin
Strobealign: flexible seed size enables ultra-fast and accurate read alignment. Genome biology 23 (1) (2022)
Kristoffer Sahlin, Marisa C W Lim, Stefan Prost
NGSpeciesID: DNA barcode and amplicon consensus generation from long-read sequencing data. Ecology and evolution 11 (3) (2021)
Kristoffer Sahlin, Paul Medvedev
Author Correction: Error correction enables use of Oxford Nanopore technology for reference-free transcriptome analysis. Nature communications 12 (1) (2021)
Kristoffer Sahlin, Paul Medvedev
Error correction enables use of Oxford Nanopore technology for reference-free transcriptome analysis. Nature communications 12 (1) (2021)
Kristoffer Sahlin
Effective sequence similarity detection with strobemers. Genome research 31 (11) (2021)