Matej Praprotnik (M Praprotnik)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 19

Top Venues

Journal of chemical theory and computation

The Journal of chemical physics

Proceedings of the National Academy of Sciences of the United States of America

Interface focus

Kemijski institut

University of Ljubljana (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Kemijski institut

Slovenia

Head of Laboratory :: Theory Department; Laboratory for Molecular Modeling

Education History

University of Ljubljana

Slovenia

PHD

University of Ljubljana

Slovenia

BSC

Publications

Amaury Coste, Ema Slejko, Julija Zavadlav, Matej Praprotnik
Developing an Implicit Solvation Machine Learning Model for Molecular Simulations of Ionic Media. Journal of chemical theory and computation 20 (1) (2023)
Petra Papež, Franci Merzel, Matej Praprotnik
Sub-THz acoustic excitation of protein motion. The Journal of chemical physics 159 (13) (2023)
Petra Papež, Franci Merzel, Matej Praprotnik
Rotational Dynamics of a Protein under Shear Flow Studied by the Eckart Frame Formalism. The journal of physical chemistry. B (2023)
Amaury Coste, Ema Slejko, Julija Zavadlav, Matej Praprotnik
Developing an Implicit Solvation Machine Learning Model for Molecular Simulations of Ionic Media. Journal of chemical theory and computation (2023)
Amaury Coste, Ema Slejko, Julija Zavadlav, Matej Praprotnik
Developing an Implicit Solvation Machine Learning Model for Molecular Simulations of Ionic Media. Journal of chemical theory and computation 20 (1) (2023)
Amaury Coste, Ema Slejko, Julija Zavadlav, Matej Praprotnik
Developing an Implicit Solvation Machine Learning Model for Molecular Simulations of Ionic Media. Journal of chemical theory and computation 20 (1) (2023)
Petra Papež, Matej Praprotnik
Dissipative Particle Dynamics Simulation of Ultrasound Propagation through Liquid Water. Journal of chemical theory and computation 18 (2) (2022)
Ermioni Papadopoulou, Julija Zavadlav, Rudolf Podgornik, Matej Praprotnik, Petros Koumoutsakos
Tuning the Dielectric Response of Water in Nanoconfinement through Surface Wettability. ACS nano (2021)
Robinson Cortes-Huerto, Matej Praprotnik, Kurt Kremer, Luigi Delle Site
From adaptive resolution to molecular dynamics of open systems. The European physical journal. B 94 (9) (2021)
Pantelis R Vlachas, Julija Zavadlav, Matej Praprotnik, Petros Koumoutsakos
Accelerated Simulations of Molecular Systems through Learning of Effective Dynamics. Journal of chemical theory and computation (2021)
Nuria López, Luigi Del Debbio, Marc Baaden, Matej Praprotnik, Laura Grigori, Catarina Simões, Serge Bogaerts, Florian Berberich, Thomas Lippert, Janne Ignatius, Philippe Lavocat, Oriol Pineda, Maria Grazia Giuffreda, Sergi Girona, Dieter Kranzlmüller, Michael M Resch, Gabriella Scipione, Thomas Schulthess
Lessons learned from urgent computing in Europe: Tackling the COVID-19 pandemic. Proceedings of the National Academy of Sciences of the United States of America 118 (46) (2021)
Stephan Thaler, Matej Praprotnik, Julija Zavadlav
Back-mapping augmented adaptive resolution simulation. The Journal of chemical physics 153 (16) (2020)
Julija Zavadlav, Siewert-Jan Marrink, Matej Praprotnik
SWINGER: a clustering algorithm for concurrent coupling of atomistic and supramolecular liquids. Interface focus 9 (3) (2019)
Julija Zavadlav, Siewert J Marrink, Matej Praprotnik
Multiscale Simulation of Protein Hydration Using the SWINGER Dynamical Clustering Algorithm. Journal of chemical theory and computation 14 (3) (2018)
Jurij Sablić, Matej Praprotnik, Rafael Delgado-Buscalioni
Deciphering the dynamics of star molecules in shear flow. Soft matter 13 (29) (2018)
Julija Zavadlav, Matej Praprotnik
Adaptive resolution simulations coupling atomistic water to dissipative particle dynamics. The Journal of chemical physics 147 (11) (2018)
Christian Krekeler, Animesh Agarwal, Christoph Junghans, Matej Praprotnik, Luigi Delle Site
Adaptive resolution molecular dynamics technique: Down to the essential. The Journal of chemical physics 149 (2) (2018)
Julija Zavadlav, Staš Bevc, Matej Praprotnik
Adaptive resolution simulations of biomolecular systems. European biophysics journal : EBJ 46 (8) (2017)
Julija Zavadlav, Rudolf Podgornik, Matej Praprotnik
Order and interactions in DNA arrays: Multiscale molecular dynamics simulation. Scientific reports 7 (1) (2017)

Matej Praprotnik.css-eqlu8i{font-size:small;padding-left:4px;} (M Praprotnik)

Publication Activity (10 Years)

Top Topics

Top Venues

Matej Praprotnik (M Praprotnik)