Matthew D Daugherty

ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 19

Top Venues

eLife

bioRxiv : the preprint server for biology

Proceedings of the National Academy of Sciences of the United States of America

PLoS pathogens

University of California San Diego

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of California San Diego

United States

Assistant Professor :: Division of Biological Sciences

Publications

Elizabeth J Fay, Kolya Isterabadi, Charles M Rezanka, Jessica Le, Matthew D Daugherty
Evolutionary and functional analyses reveal a role for the RHIM in tuning RIPK3 activity across vertebrates. bioRxiv : the preprint server for biology (2024)
Xi Liu, Yang Li, Lennice Castro, Zanlin Yu, Yifan Cheng, Matthew D Daugherty, John D Gross
Structure of the E3 ligase CRL2-ZYG11B with substrates reveals the molecular basis for N-degron recognition and ubiquitination. bioRxiv : the preprint server for biology (2024)
Elizabeth J Fay, Kolya Isterabadi, Charles M Rezanka, Jessica Le, Matthew D Daugherty
Evolutionary and functional analyses reveal a role for the RHIM in tuning RIPK3 activity across vertebrates. bioRxiv : the preprint server for biology (2024)
Dustin R Glasner, Matthew D Daugherty
Unchecked growth: Pushing the limits on RNA virus genome size in the absence of known proofreading. Proceedings of the National Academy of Sciences of the United States of America 121 (36) (2024)
Brian V Tsu, Rimjhim Agarwal, Nandan S Gokhale, Jessie Kulsuptrakul, Andrew P Ryan, Elizabeth J Fay, Lennice K Castro, Christopher Beierschmitt, Christina Yap, Elizabeth A Turcotte, Sofia E Delgado-Rodriguez, Russell E Vance, Jennifer L Hyde, Ram Savan, Patrick S Mitchell, Matthew D Daugherty
Host-specific sensing of coronaviruses and picornaviruses by the CARD8 inflammasome. PLoS biology 21 (6) (2023)
Taruna Pandey, Chinmay A Kalluraya, Bingying Wang, Ting Xu, Xinya Huang, Shouhong Guang, Matthew D Daugherty, Dengke K Ma
Acquired stress resilience through bacteria-to-nematode interdomain horizontal gene transfer. The EMBO journal (2023)
Sofia E Delgado-Rodriguez, Andrew P Ryan, Matthew D Daugherty
Recurrent Loss of Macrodomain Activity in Host Immunity and Viral Proteins. Pathogens (Basel, Switzerland) 12 (5) (2023)
Taruna Pandey, Chinmay Kalluraya, Bingying Wang, Ting Xu, Xinya Huang, Shouhong Guang, Matthew D Daugherty, Dengke K Ma
Acquired stress resilience through bacteria-to-nematode horizontal gene transfer. bioRxiv : the preprint server for biology (2023)
Chinmay A Kalluraya, Alexander J Weitzel, Brian V Tsu, Matthew D Daugherty
Reply to Redmond and McLysaght: Uncertainty in the origin of amphioxus IRBP homologs. Proceedings of the National Academy of Sciences of the United States of America 120 (34) (2023)
Janice M Reimer, Andrea M Dickey, Yu Xuan Lin, Robert G Abrisch, Sebastian Mathea, Deep Chatterjee, Elizabeth J Fay, Stefan Knapp, Matthew D Daugherty, Samara L Reck-Peterson, Andres E Leschziner
Structure of LRRK1 and mechanisms of autoinhibition and activation. Nature structural & molecular biology (2023)
Chinmay A Kalluraya, Alexander J Weitzel, Brian V Tsu, Matthew D Daugherty
Bacterial origin of a key innovation in the evolution of the vertebrate eye. Proceedings of the National Academy of Sciences of the United States of America 120 (16) (2023)
Donté Alexander Stevens, Christopher Beierschmitt, Swetha Mahesula, Miles R Corley, John Salogiannis, Brian V Tsu, Bryant Cao, Andrew P Ryan, Hiroyuki Hakozawki, Samara L Reck-Peterson, Matthew D Daugherty
Antiviral function and viral antagonism of the rapidly evolving dynein activating adaptor NINL. eLife 11 (2022)
Brian V Tsu, Rimjhim Agarwal, Nandan S Gokhale, Jessie Kulsuptrakul, Andrew P Ryan, Lennice K Castro, Christopher M Beierschmitt, Elizabeth A Turcotte, Elizabeth J Fay, Russell E Vance, Jennifer L Hyde, Ram Savan, Patrick S Mitchell, Matthew D Daugherty
Host specific sensing of coronaviruses and picornaviruses by the CARD8 inflammasome. bioRxiv : the preprint server for biology (2022)
Brian V Tsu, Christopher Beierschmitt, Andrew P Ryan, Rimjhim Agarwal, Patrick S Mitchell, Matthew D Daugherty
Diverse viral proteases activate the NLRP1 inflammasome. eLife 10 (2021)
Anusorn Mudla, Yanfei Jiang, Kei-Ichiro Arimoto, Bingxian Xu, Adarsh Rajesh, Andy P Ryan, Wei Wang, Matthew D Daugherty, Dong-Er Zhang, Nan Hao
Cell-cycle-gated feedback control mediates desensitization to interferon stimulation. eLife 9 (2020)
Johannes Schwerk, Frank W Soveg, Andrew P Ryan, Kerri R Thomas, Lauren D Hatfield, Snehal Ozarkar, Adriana Forero, Alison M Kell, Justin A Roby, Lomon So, Jennifer L Hyde, Michael Gale, Matthew D Daugherty, Ram Savan
RNA-binding protein isoforms ZAP-S and ZAP-L have distinct antiviral and immune resolution functions. Nature immunology 20 (12) (2019)
Jacob M Garrigues, Brian V Tsu, Matthew D Daugherty, Amy E Pasquinelli
Diversification of the Caenorhabditis heat shock response by Helitron transposable elements. eLife 8 (2019)
Joseph Chavarría-Smith, Patrick S Mitchell, Alvin M Ho, Matthew D Daugherty, Russell E Vance
Functional and Evolutionary Analyses Identify Proteolysis as a General Mechanism for NLRP1 Inflammasome Activation. PLoS pathogens 12 (12) (2016)
Matthew D Daugherty, Aaron M Schaller, Adam P Geballe, Harmit Singh Malik
Evolution-guided functional analyses reveal diverse antiviral specificities encoded by IFIT1 genes in mammals. eLife 5 (2016)

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Publication Activity (10 Years)

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Matthew D Daugherty