Mohamed N Omar (Mohamed Omar)

ORCID

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 21

Top Venues

Molecular cancer research : MCR

Nature communications

medRxiv : the preprint server for health sciences

Vaccines

Weill Cornell Medicine

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Weill Cornell Medicine Mar 02 2020

United States

Postdoctoral Associate :: Department of Pathology and Laboratory Medicine

Mansoura University Hospital Feb 28 2018 - Sep 30 2019

Egypt

Intern doctor

Johns Hopkins Medicine Feb 15 2019 - Apr 25 2019

United States

Research intern

Publications

Mohamed N Omar, Zhuoran Xu, Sophie B Rand, Mohammad K Alexanderani, Daniela C Salles, Itzel Valencia, Edward M Schaeffer, Brian D Robinson, Tamara L Lotan, Massimo Loda, Luigi Marchionni
Semi-Supervised, Attention-Based Deep Learning for Predicting TMPRSS2:ERG Fusion Status in Prostate Cancer Using Whole Slide Images. Molecular cancer research : MCR 22 (4) (2024)
Hubert Pakula, Mohamed N Omar, Ryan Carelli, Filippo Pederzoli, Giuseppe Nicolò Fanelli, Tania Pannellini, Fabio Socciarelli, Lucie Van Emmenis, Silvia Rodrigues, Caroline Fidalgo-Ribeiro, Pier Vitale Nuzzo, Nicholas J Brady, Wikum Dinalankara, Madhavi Jere, Itzel Valencia, Christopher Saladino, Jason Stone, Caitlin Unkenholz, Richard Garner, Mohammad K Alexanderani, Francesca Khani, Francisca Nunes de Almeida, Cory Abate-Shen, Matthew B Greenblatt, David S Rickman, Christopher E Barbieri, Brian D Robinson, Luigi Marchionni, Massimo Loda
Distinct mesenchymal cell states mediate prostate cancer progression. Nature communications 15 (1) (2024)
Hubert Pakula, Mohamed N Omar, Ryan Carelli, Filippo Pederzoli, Giuseppe Nicolò Fanelli, Tania Pannellini, Fabio Socciarelli, Lucie Van Emmenis, Silvia Rodrigues, Caroline Fidalgo-Ribeiro, Pier Vitale Nuzzo, Nicholas J Brady, Wikum Dinalankara, Madhavi Jere, Itzel Valencia, Christopher Saladino, Jason Stone, Caitlin Unkenholz, Richard Garner, Mohammad K Alexanderani, Francesca Khani, Francisca Nunes de Almeida, Cory Abate-Shen, Matthew B Greenblatt, David S Rickman, Christopher E Barbieri, Brian D Robinson, Luigi Marchionni, Massimo Loda
Distinct mesenchymal cell states mediate prostate cancer progression. Nature communications 15 (1) (2024)
Hubert Pakula, Mohamed N Omar, Ryan Carelli, Filippo Pederzoli, Giuseppe Nicolò Fanelli, Tania Pannellini, Fabio Socciarelli, Lucie Van Emmenis, Silvia Rodrigues, Caroline Fidalgo-Ribeiro, Pier Vitale Nuzzo, Nicholas J Brady, Wikum Dinalankara, Madhavi Jere, Itzel Valencia, Christopher Saladino, Jason Stone, Caitlin Unkenholz, Richard Garner, Mohammad K Alexanderani, Francesca Khani, Francisca Nunes de Almeida, Cory Abate-Shen, Matthew B Greenblatt, David S Rickman, Christopher E Barbieri, Brian D Robinson, Luigi Marchionni, Massimo Loda
Distinct mesenchymal cell states mediate prostate cancer progression. Nature communications 15 (1) (2024)
Hubert Pakula, Mohamed N Omar, Ryan Carelli, Filippo Pederzoli, Giuseppe Nicolò Fanelli, Tania Pannellini, Fabio Socciarelli, Lucie Van Emmenis, Silvia Rodrigues, Caroline Fidalgo-Ribeiro, Pier Vitale Nuzzo, Nicholas J Brady, Wikum Dinalankara, Madhavi Jere, Itzel Valencia, Christopher Saladino, Jason Stone, Caitlin Unkenholz, Richard Garner, Mohammad K Alexanderani, Francesca Khani, Francisca Nunes de Almeida, Cory Abate-Shen, Matthew B Greenblatt, David S Rickman, Christopher E Barbieri, Brian D Robinson, Luigi Marchionni, Massimo Loda
Distinct mesenchymal cell states mediate prostate cancer progression. Nature communications 15 (1) (2024)
Hubert Pakula, Mohamed N Omar, Ryan Carelli, Filippo Pederzoli, Giuseppe Nicolò Fanelli, Tania Pannellini, Fabio Socciarelli, Lucie Van Emmenis, Silvia Rodrigues, Caroline Fidalgo-Ribeiro, Pier Vitale Nuzzo, Nicholas J Brady, Wikum Dinalankara, Madhavi Jere, Itzel Valencia, Christopher Saladino, Jason Stone, Caitlin Unkenholz, Richard Garner, Mohammad K Alexanderani, Francesca Khani, Francisca Nunes de Almeida, Cory Abate-Shen, Matthew B Greenblatt, David S Rickman, Christopher E Barbieri, Brian D Robinson, Luigi Marchionni, Massimo Loda
Distinct mesenchymal cell states mediate prostate cancer progression. Nature communications 15 (1) (2024)
Mohamed N Omar, Zhuoran Xu, Sophie B Rand, Mohammad K Alexanderani, Daniela C Salles, Itzel Valencia, Edward M Schaeffer, Brian D Robinson, Tamara L Lotan, Massimo Loda, Luigi Marchionni
Semi-Supervised, Attention-Based Deep Learning for Predicting TMPRSS2:ERG Fusion Status in Prostate Cancer Using Whole Slide Images. Molecular cancer research : MCR (2024)
Mohamed N Omar, Zhuoran Xu, Sophie B Rand, Mohammad K Alexanderani, Daniela C Salles, Itzel Valencia, Edward M Schaeffer, Brian D Robinson, Tamara L Lotan, Massimo Loda, Luigi Marchionni
Semi-Supervised, Attention-Based Deep Learning for Predicting TMPRSS2:ERG Fusion Status in Prostate Cancer Using Whole Slide Images. Molecular cancer research : MCR 22 (4) (2024)
Hubert Pakula, Mohamed N Omar, Ryan Carelli, Filippo Pederzoli, Giuseppe Nicolò Fanelli, Tania Pannellini, Fabio Socciarelli, Lucie Van Emmenis, Silvia Rodrigues, Caroline Fidalgo-Ribeiro, Pier Vitale Nuzzo, Nicholas J Brady, Wikum Dinalankara, Madhavi Jere, Itzel Valencia, Christopher Saladino, Jason Stone, Caitlin Unkenholz, Richard Garner, Mohammad K Alexanderani, Francesca Khani, Francisca Nunes de Almeida, Cory Abate-Shen, Matthew B Greenblatt, David S Rickman, Christopher E Barbieri, Brian D Robinson, Luigi Marchionni, Massimo Loda
Distinct mesenchymal cell states mediate prostate cancer progression. Nature communications 15 (1) (2024)
Mohamed N Omar, Zhuoran Xu, Sophie B Rand, Mohammad K Alexanderani, Daniela C Salles, Itzel Valencia, Edward M Schaeffer, Brian D Robinson, Tamara L Lotan, Massimo Loda, Luigi Marchionni
Semi-Supervised, Attention-Based Deep Learning for Predicting TMPRSS2:ERG Fusion Status in Prostate Cancer Using Whole Slide Images. Molecular cancer research : MCR 22 (4) (2024)
Mohamed N Omar, Zhuoran Xu, Sophie B Rand, Mohammad K Alexanderani, Daniela C Salles, Itzel Valencia, Edward M Schaeffer, Brian D Robinson, Tamara L Lotan, Massimo Loda, Luigi Marchionni
Semi-Supervised, Attention-Based Deep Learning for Predicting TMPRSS2:ERG Fusion Status in Prostate Cancer Using Whole Slide Images. Molecular cancer research : MCR 22 (4) (2024)
Mohamed N Omar, Zhuoran Xu, Sophie B Rand, Mohammad K Alexanderani, Daniela C Salles, Itzel Valencia, Edward M Schaeffer, Brian D Robinson, Tamara L Lotan, Massimo Loda, Luigi Marchionni
Semi-Supervised, Attention-Based Deep Learning for Predicting TMPRSS2:ERG Fusion Status in Prostate Cancer Using Whole Slide Images. Molecular cancer research : MCR (2024)
Itzel Valencia, Pier Vitale Nuzzo, Edoardo Francini, Francesco Ravera, Giuseppe Nicolò Fanelli, Sara Bleve, Cristian Scatena, Luigi Marchionni, Mohamed N Omar
Gene Signature for Predicting Metastasis in Prostate Cancer Using Primary Tumor Expression Profiles. medRxiv : the preprint server for health sciences (2024)
Hubert Pakula, Mohamed N Omar, Ryan Carelli, Filippo Pederzoli, Giuseppe Nicolò Fanelli, Tania Pannellini, Fabio Socciarelli, Lucie Van Emmenis, Silvia Rodrigues, Caroline Fidalgo-Ribeiro, Pier Vitale Nuzzo, Nicholas J Brady, Wikum Dinalankara, Madhavi Jere, Itzel Valencia, Christopher Saladino, Jason Stone, Caitlin Unkenholz, Richard Garner, Mohammad K Alexanderani, Francesca Khani, Francisca Nunes de Almeida, Cory Abate-Shen, Matthew B Greenblatt, David S Rickman, Christopher E Barbieri, Brian D Robinson, Luigi Marchionni, Massimo Loda
Distinct mesenchymal cell states mediate prostate cancer progression. Nature communications 15 (1) (2024)
Hubert Pakula, Mohamed N Omar, Ryan Carelli, Filippo Pederzoli, Giuseppe Nicol Fanelli, Tania Pannellini, Lucie Van Emmenis, Silvia Rodrigues, Caroline Fidalgo-Ribeiro, Pier V Nuzzo, Nicholas J Brady, Madhavi Jere, Caitlin Unkenholz, Mohammad K Alexanderani, Francesca Khani, Francisca Nunes de Almeida, Cory Abate-Shen, Matthew B Greenblatt, David S Rickman, Christopher E Barbieri, Brian D Robinson, Luigi Marchionni, Massimo Loda
Distinct mesenchymal cell states mediate prostate cancer progression. bioRxiv : the preprint server for biology (2023)
Mohamed N Omar, Pier Vitale Nuzzo, Francesco Ravera, Sara Bleve, Giuseppe Nicolò Fanelli, Claudio Zanettini, Itzel Valencia, Luigi Marchionni
Notch-based gene signature for predicting the response to neoadjuvant chemotherapy in triple-negative breast cancer. Journal of translational medicine 21 (1) (2023)
Luigi Marchionni, Francisco Pereira Lobo, Rumen Kostadinov, Anna Serra, Federico Genzano Besso, Silvia Deaglio, Piero Stratta, Monica Berrino, Claudio Zanettini, Eddie Luidy Imada, Mohamed N Omar, Gianluca Gaidano, Benedetto Bruno, Giuseppe Saglio, Antonio Amoroso
Donor-derived acute myeloid leukemia in solid organ transplantation. American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons 22 (12) (2022)
Claudio Zanettini, Mohamed N Omar, Wikum Dinalankara, Eddie Luidy Imada, Elizabeth Colantuoni, Giovanni Parmigiani, Luigi Marchionni
Influenza Vaccination and COVID-19 Mortality in the USA: An Ecological Study. Vaccines 9 (5) (2021)
Jacob Rosenthal, Ryan Carelli, Mohamed N Omar, David Brundage, Ella Halbert, Jackson Nyman, Surya N Hari, Eliezer M Van Allen, Luigi Marchionni, Renato Umeton, Massimo Loda
Building tools for machine learning and artificial intelligence in cancer research: best practices and a case study with the PathML toolkit for computational pathology. Molecular cancer research : MCR (2021)
Claudio Zanettini, Mohamed N Omar, Wikum Dinalankara, Eddie Luidy Imada, Elizabeth Colantuoni, Giovanni Parmigiani, Luigi Marchionni
covid19census: U.S. and Italy COVID-19 metrics and other epidemiological data. Database : the journal of biological databases and curation 2021 (2021)
Claudio Zanettini, Mohamed N Omar, Michael J Texada, Eddie Luidy Imada, Elizabeth Colantuoni, Giovanni Parmigiani, Luigi Marchionni
Influenza Vaccination and COVID19 Mortality in the USA. medRxiv : the preprint server for health sciences (2020)

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Publication Activity (10 Years)

Top Topics

Top Venues

Mohamed N Omar (Mohamed Omar)