Nikolay E Shirokikh (Nikolay Shirokikh, N E Shirokikh)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 18

Top Topics

Single Molecule

Top Venues

Nature communications

Life science alliance

Nucleic acids research

Biochemical Society transactions

This page only lists publications with an associated author ORCID identifier.

Publications

Marco Guarnacci, Pei-Hong Zhang, Madhu Kanchi, Yu-Ting Hung, Hanrong Lin, Nikolay E Shirokikh, Li Yang, Thomas Preiss
Substrate diversity of NSUN enzymes and links of 5-methylcytosine to mRNA translation and turnover. Life science alliance 7 (9) (2024)
P Acera Mateos, A J Sethi, A Ravindran, Akanksha Srivastava, K Woodward, S Mahmud, M Kanchi, M Guarnacci, J Xu, Zaka Wing-Sze Yuen, You Zhou, Alexandra Sneddon, W Hamilton, J Gao, L M Starrs, Rippei Hayashi, Vihandha O Wickramasinghe, Kathi Zarnack, Thomas Preiss, Gaetan Burgio, N Dehorter, Nikolay E Shirokikh, Eduardo Eyras
Prediction of m6A and m5C at single-molecule resolution reveals a transcriptome-wide co-occurrence of RNA modifications. Nature communications 15 (1) (2024)
P Acera Mateos, A J Sethi, A Ravindran, Akanksha Srivastava, K Woodward, S Mahmud, M Kanchi, M Guarnacci, J Xu, Zaka Wing-Sze Yuen, You Zhou, Alexandra Sneddon, W Hamilton, J Gao, L M Starrs, Rippei Hayashi, Vihandha O Wickramasinghe, Kathi Zarnack, Thomas Preiss, Gaetan Burgio, N Dehorter, Nikolay E Shirokikh, Eduardo Eyras
Prediction of m6A and m5C at single-molecule resolution reveals a transcriptome-wide co-occurrence of RNA modifications. Nature communications 15 (1) (2024)
Marco Guarnacci, Pei-Hong Zhang, Madhu Kanchi, Yu-Ting Hung, Hanrong Lin, Nikolay E Shirokikh, Li Yang, Thomas Preiss
Substrate diversity of NSUN enzymes and links of 5-methylcytosine to mRNA translation and turnover. Life science alliance 7 (9) (2024)
Alexandra Sneddon, Agin Ravindran, Somasundhari Shanmuganandam, Madhu Kanchi, Nadine Hein, Simon Jiang, Nikolay E Shirokikh, Eduardo Eyras
Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing with RISER. Nature communications 15 (1) (2024)
Alexandra Sneddon, Agin Ravindran, Somasundhari Shanmuganandam, Madhu Kanchi, Nadine Hein, Simon Jiang, Nikolay E Shirokikh, Eduardo Eyras
Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing with RISER. Nature communications 15 (1) (2024)
Marco Guarnacci, Pei-Hong Zhang, Madhu Kanchi, Yu-Ting Hung, Hanrong Lin, Nikolay E Shirokikh, Li Yang, Thomas Preiss
Substrate diversity of NSUN enzymes and links of 5-methylcytosine to mRNA translation and turnover. Life science alliance 7 (9) (2024)
Attila Horvath, Yoshika Janapala, Katrina Woodward, Shafi Mahmud, Alice Cleynen, Elizabeth E Gardiner, Ross D Hannan, Eduardo Eyras, Thomas Preiss, Nikolay E Shirokikh
Comprehensive translational profiling and STE AI uncover rapid control of protein biosynthesis during cell stress. Nucleic acids research 52 (13) (2024)
Marco Guarnacci, Pei-Hong Zhang, Madhu Kanchi, Yu-Ting Hung, Hanrong Lin, Nikolay E Shirokikh, Li Yang, Thomas Preiss
Substrate diversity of NSUN enzymes and links of 5-methylcytosine to mRNA translation and turnover. Life science alliance 7 (9) (2024)
P Acera Mateos, A J Sethi, A Ravindran, Akanksha Srivastava, K Woodward, S Mahmud, M Kanchi, M Guarnacci, J Xu, Zaka Wing-Sze Yuen, You Zhou, Alexandra Sneddon, W Hamilton, J Gao, L M Starrs, Rippei Hayashi, Vihandha O Wickramasinghe, Kathi Zarnack, Thomas Preiss, Gaetan Burgio, N Dehorter, Nikolay E Shirokikh, Eduardo Eyras
Prediction of m6A and m5C at single-molecule resolution reveals a transcriptome-wide co-occurrence of RNA modifications. Nature communications 15 (1) (2024)
Attila Horvath, Yoshika Janapala, Katrina Woodward, Shafi Mahmud, Alice Cleynen, Elizabeth E Gardiner, Ross D Hannan, Eduardo Eyras, Thomas Preiss, Nikolay E Shirokikh
Comprehensive translational profiling and STE AI uncover rapid control of protein biosynthesis during cell stress. Nucleic acids research 52 (13) (2024)
Attila Horvath, Yoshika Janapala, Katrina Woodward, Shafi Mahmud, Alice Cleynen, Elizabeth E Gardiner, Ross D Hannan, Eduardo Eyras, Thomas Preiss, Nikolay E Shirokikh
Comprehensive translational profiling and STE AI uncover rapid control of protein biosynthesis during cell stress. Nucleic acids research (2024)
P Acera Mateos, A J Sethi, A Ravindran, Akanksha Srivastava, K Woodward, S Mahmud, M Kanchi, M Guarnacci, J Xu, Zaka Wing-Sze Yuen, You Zhou, Alexandra Sneddon, W Hamilton, J Gao, L M Starrs, Rippei Hayashi, Vihandha O Wickramasinghe, Kathi Zarnack, Thomas Preiss, Gaetan Burgio, N Dehorter, Nikolay E Shirokikh, Eduardo Eyras
Prediction of m6A and m5C at single-molecule resolution reveals a transcriptome-wide co-occurrence of RNA modifications. Nature communications 15 (1) (2024)
Marco Guarnacci, Pei-Hong Zhang, Madhu Kanchi, Yu-Ting Hung, Hanrong Lin, Nikolay E Shirokikh, Li Yang, Thomas Preiss
Substrate diversity of NSUN enzymes and links of 5-methylcytosine to mRNA translation and turnover. Life science alliance 7 (9) (2024)
Aaron B Smith, Diep Ray Ganguly, Marten Moore, Andrew F Bowerman, Yoshika Janapala, Nikolay E Shirokikh, Barry James Pogson, Peter A Crisp
Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation. The Plant journal : for cell and molecular biology (2023)
Katrina Woodward, Nikolay E Shirokikh
Translational control in cell ageing: an update. Biochemical Society transactions 49 (6) (2022)
Chikako Ragan, Gregory J Goodall, Nikolay E Shirokikh, Thomas Preiss
Insights into the biogenesis and potential functions of exonic circular RNA. Scientific reports 9 (1) (2019)
Nikolay E Shirokikh, Thomas Preiss
Translation initiation by cap-dependent ribosome recruitment: Recent insights and open questions. Wiley interdisciplinary reviews. RNA 9 (4) (2018)