Osamu Nishimura

ORCID

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 9

Top Venues

eLife

Genome research

Proceedings of the National Academy of Sciences of the United States of America

PloS one

Kyoto University (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

Kyoto University Mar 23 2016 - Mar 23 2016

Japan

PHD :: Graduate School of Science

Publications

Kazuaki Yamaguchi, Yoshinobu Uno, Mitsutaka Kadota, Osamu Nishimura, Ryo Nozu, Kiyomi Murakumo, Rui Matsumoto, Keiichi Sato, Shigehiro Kuraku
Elasmobranch genome sequencing reveals evolutionary trends of vertebrate karyotypic organization. Genome research (2023)
Yasunori Enomoto, Hiroaki Katsura, Takashi Fujimura, Akira Ogata, Saori Baba, Akira Yamaoka, Miho Kihara, Takaya Abe, Osamu Nishimura, Mitsutaka Kadota, Daisuke Hazama, Yugo Tanaka, Yoshimasa Maniwa, Tatsuya Nagano, Mitsuru Morimoto
Autocrine TGF-β-positive feedback in profibrotic AT2-lineage cells plays a crucial role in non-inflammatory lung fibrogenesis. Nature communications 14 (1) (2023)
Merve Bilgic, Quan Wu, Taeko Suetsugu, Atsunori Shitamukai, Yuji Tsunekawa, Tomomi Shimogori, Mitsutaka Kadota, Osamu Nishimura, Shigehiro Kuraku, Hiroshi Kiyonari, Fumio Matsuzaki
Truncated radial glia as a common precursor in the late corticogenesis of gyrencephalic mammals. eLife 12 (2023)
Osamu Nishimura, John Rozewicki, Kazuaki Yamaguchi, Kaori Tatsumi, Yuta Ohishi, Tazro Ohta, Masaru Yagura, Taiki Niwa, Chiharu Tanegashima, Akinori Teramura, Shotaro Hirase, Akane Kawaguchi, Milton Tan, Salvatore D'Aniello, Filipe Castro, André Machado, Mitsumasa Koyanagi, Akihisa Terakita, Ryo Misawa, Masayuki Horie, Junna Kawasaki, Takashi Asahida, Atsuko Yamaguchi, Kiyomi Murakumo, Rui Matsumoto, Iker Irisarri, Norio Miyamoto, Atsushi Toyoda, Sho Tanaka, Tatsuya Sakamoto, Yasuko Semba, Shinya Yamauchi, Kazuyuki Yamada, Kiyonori Nishida, Itsuki Kiyatake, Keiichi Sato, Susumu Hyodo, Mitsutaka Kadota, Yoshinobu Uno, Shigehiro Kuraku
Squalomix: shark and ray genome analysis consortium and its data sharing platform. F1000Research 11 (2022)
Ahammad Kabir, Risa Ieda, Sho Hosoya, Daigaku Fujikawa, Kazufumi Atsumi, Shota Tajima, Aoi Nozawa, Takashi Koyama, Shotaro Hirase, Osamu Nakamura, Mitsutaka Kadota, Osamu Nishimura, Shigehiro Kuraku, Yasukazu Nakamura, Hisato Kobayashi, Atsushi Toyoda, Satoshi Tasumi, Kiyoshi Kikuchi
Repeated translocation of a supergene underlying rapid sex chromosome turnover in Takifugu pufferfish. Proceedings of the National Academy of Sciences of the United States of America 119 (23) (2022)
Kazuaki Yamaguchi, Mitsutaka Kadota, Osamu Nishimura, Yuta Ohishi, Yuki Naito, Shigehiro Kuraku
Technical considerations in Hi-C scaffolding and evaluation of chromosome-scale genome assemblies. Molecular ecology 30 (23) (2021)
Koh Onimaru, Kaori Tatsumi, Chiharu Tanegashima, Mitsutaka Kadota, Osamu Nishimura, Shigehiro Kuraku
Developmental hourglass and heterochronic shifts in fin and limb development. eLife 10 (2021)
Koh Onimaru, Osamu Nishimura, Shigehiro Kuraku
Predicting gene regulatory regions with a convolutional neural network for processing double-strand genome sequence information. PloS one 15 (7) (2020)
Ryo Nabeshima, Osamu Nishimura, Takako Maeda, Natsumi Shimizu, Takahiro Ide, Kenta Yashiro, Yasuo Sakai, Chikara Meno, Mitsutaka Kadota, Hidetaka Shiratori, Shigehiro Kuraku, Hiroshi Hamada
Loss of Fam60a, a Sin3a subunit, results in embryonic lethality and is associated with aberrant methylation at a subset of gene promoters. eLife 7 (2018)

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Publication Activity (10 Years)

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Osamu Nishimura