Shigehiro Kuraku

ResearcherID Researcher Name Resolver ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 25

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

eLife

Genome biology and evolution

Journal of experimental zoology. Part B, Molecular and developmental evolution

RIKEN Center for Biosystems Dynamics Research

Kyoto University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

RIKEN Center for Biosystems Dynamics Research Apr 1o 2019

Japan

Team Leader :: Laboratory for Phyloinformatics

Education History

Kyoto University Apr 1o 2001 - Jan 25o 2005

Japan

PHD :: Graduate School of Science

Publications

Kazuaki Yamaguchi, Mitsumasa Koyanagi, Keiichi Sato, Akihisa Terakita, Shigehiro Kuraku
Whale shark rhodopsin adapted to deep-sea lifestyle by a substitution associated with human disease. Proceedings of the National Academy of Sciences of the United States of America 120 (13) (2023)
Kazuaki Yamaguchi, Yoshinobu Uno, Mitsutaka Kadota, Osamu Nishimura, Ryo Nozu, Kiyomi Murakumo, Rui Matsumoto, Keiichi Sato, Shigehiro Kuraku
Elasmobranch genome sequencing reveals evolutionary trends of vertebrate karyotypic organization. Genome research (2023)
Yuta Ohishi, Shogo Arimura, Koya Shimoyama, Kazuyuki Yamada, Shinya Yamauchi, Taku Horie, Susumu Hyodo, Shigehiro Kuraku
Egg Yolk Protein Homologs Identified in Live-Bearing Sharks: Co-Opted in the Lecithotrophy-to-Matrotrophy Shift? Genome biology and evolution 15 (3) (2023)
Kazuaki Yamaguchi, Mitsumasa Koyanagi, Keiichi Sato, Akihisa Terakita, Shigehiro Kuraku
Whale shark rhodopsin adapted to deep-sea lifestyle by a substitution associated with human disease. Proceedings of the National Academy of Sciences of the United States of America 120 (13) (2023)
Merve Bilgic, Quan Wu, Taeko Suetsugu, Atsunori Shitamukai, Yuji Tsunekawa, Tomomi Shimogori, Mitsutaka Kadota, Osamu Nishimura, Shigehiro Kuraku, Hiroshi Kiyonari, Fumio Matsuzaki
Truncated radial glia as a common precursor in the late corticogenesis of gyrencephalic mammals. eLife 12 (2023)
David M Linz, Yuichiro Hara, Kevin D Deem, Shigehiro Kuraku, Shigeo Hayashi, Yoshinori Tomoyasu
Transcriptomic exploration of the Coleopteran wings reveals insight into the evolution of novel structures associated with the beetle elytron. Journal of experimental zoology. Part B, Molecular and developmental evolution 340 (2) (2023)
Kazuaki Yamaguchi, Mitsumasa Koyanagi, Keiichi Sato, Akihisa Terakita, Shigehiro Kuraku
Whale shark rhodopsin adapted to deep-sea lifestyle by a substitution associated with human disease. Proceedings of the National Academy of Sciences of the United States of America 120 (13) (2023)
Yuichiro Hara, Shigehiro Kuraku
The impact of local genomic properties on the evolutionary fate of genes. eLife 12 (2023)
David M Linz, Yuichiro Hara, Kevin D Deem, Shigehiro Kuraku, Shigeo Hayashi, Yoshinori Tomoyasu
Transcriptomic exploration of the Coleopteran wings reveals insight into the evolution of novel structures associated with the beetle elytron. Journal of experimental zoology. Part B, Molecular and developmental evolution (2023)
David M Linz, Yuichiro Hara, Kevin D Deem, Shigehiro Kuraku, Shigeo Hayashi, Yoshinori Tomoyasu
Transcriptomic exploration of the Coleopteran wings reveals insight into the evolution of novel structures associated with the beetle elytron. Journal of experimental zoology. Part B, Molecular and developmental evolution 340 (2) (2023)
Yuta Ohishi, Shogo Arimura, Koya Shimoyama, Kazuyuki Yamada, Shinya Yamauchi, Taku Horie, Susumu Hyodo, Shigehiro Kuraku
Egg Yolk Protein Homologs Identified in Live-Bearing Sharks: Co-opted in the Lecithotrophy-to-Matrotrophy Shift? Genome biology and evolution (2023)
Federico G Hoffmann, Jay F Storz, Shigehiro Kuraku, Michael W Vandewege, Juan C Opazo
Whole-Genome Duplications and the Diversification of the Globin-X Genes of Vertebrates. Genome biology and evolution 13 (10) (2022)
Mark L Blaxter, John M Archibald, Anna K Childers, Jonathan A Coddington, Keith A Crandall, Federica Di Palma, Richard Durbin, Scott V Edwards, Jennifer Ann Marshall Graves, Kevin J Hackett, Neil Hall, Erich D Jarvis, Rebecca N Johnson, Elinor K Karlsson, W John Kress, Shigehiro Kuraku, Mara K N Lawniczak, Kerstin Lindblad-Toh, Jose Victor Lopez, Nancy A Moran, Gene E Robinson, Oliver A Ryder, Beth Shapiro, Pamela S Soltis, Sebastien Roch, Guo-Jie Zhang, Harris A Lewin
Why sequence all eukaryotes? Proceedings of the National Academy of Sciences of the United States of America 119 (4) (2022)
Osamu Nishimura, John Rozewicki, Kazuaki Yamaguchi, Kaori Tatsumi, Yuta Ohishi, Tazro Ohta, Masaru Yagura, Taiki Niwa, Chiharu Tanegashima, Akinori Teramura, Shotaro Hirase, Akane Kawaguchi, Milton Tan, Salvatore D'Aniello, Filipe Castro, André Machado, Mitsumasa Koyanagi, Akihisa Terakita, Ryo Misawa, Masayuki Horie, Junna Kawasaki, Takashi Asahida, Atsuko Yamaguchi, Kiyomi Murakumo, Rui Matsumoto, Iker Irisarri, Norio Miyamoto, Atsushi Toyoda, Sho Tanaka, Tatsuya Sakamoto, Yasuko Semba, Shinya Yamauchi, Kazuyuki Yamada, Kiyonori Nishida, Itsuki Kiyatake, Keiichi Sato, Susumu Hyodo, Mitsutaka Kadota, Yoshinobu Uno, Shigehiro Kuraku
Squalomix: shark and ray genome analysis consortium and its data sharing platform. F1000Research 11 (2022)
Ahammad Kabir, Risa Ieda, Sho Hosoya, Daigaku Fujikawa, Kazufumi Atsumi, Shota Tajima, Aoi Nozawa, Takashi Koyama, Shotaro Hirase, Osamu Nakamura, Mitsutaka Kadota, Osamu Nishimura, Shigehiro Kuraku, Yasukazu Nakamura, Hisato Kobayashi, Atsushi Toyoda, Satoshi Tasumi, Kiyoshi Kikuchi
Repeated translocation of a supergene underlying rapid sex chromosome turnover in Takifugu pufferfish. Proceedings of the National Academy of Sciences of the United States of America 119 (23) (2022)
Milton Tan, Anthony K Redmond, Helen Dooley, Ryo Nozu, Keiichi Sato, Shigehiro Kuraku, Sergey Koren, Adam M Phillippy, Alistair D M Dove, Timothy Read
The whale shark genome reveals patterns of vertebrate gene family evolution. eLife 10 (2021)
Kazuaki Yamaguchi, Mitsutaka Kadota, Osamu Nishimura, Yuta Ohishi, Yuki Naito, Shigehiro Kuraku
Technical considerations in Hi-C scaffolding and evaluation of chromosome-scale genome assemblies. Molecular ecology 30 (23) (2021)
Peiwen Xiong, Christopher Darrin Hulsey, Carmelo Fruciano, Wai Yee Wong, Alexander Nater, Andreas F Kautt, Oleg Simakov, Martin Pippel, Shigehiro Kuraku, Axel Meyer, Paolo Franchini
The comparative genomic landscape of adaptive radiation in crater lake cichlid fishes. Molecular ecology 30 (4) (2021)
Tetsuo Ohnishi, Yuji Kiyama, Fumiko Arima-Yoshida, Mitsutaka Kadota, Tomoe Ichikawa, Kazuyuki Yamada, Akiko Watanabe, Hisako Ohba, Kaori Tanaka, Akihiro Nakaya, Yasue Horiuchi, Yoshimi Iwayama, Manabu Toyoshima, Itone Ogawa, Chie Shimamoto-Mitsuyama, Motoko Maekawa, Shabeesh Balan, Makoto Arai, Mitsuhiro Miyashita, Kazuya Toriumi, Yayoi Nozaki, Rumi Kurokawa, Kazuhiro Suzuki, Akane Yoshikawa, Tomoko Toyota, Toshihiko Hosoya, Hiroyuki Okuno, Haruhiko Bito, Masanari Itokawa, Shigehiro Kuraku, Toshiya Manabe, Takeo Yoshikawa
Cooperation of LIM domain-binding 2 (LDB2) with EGR in the pathogenesis of schizophrenia. EMBO molecular medicine 13 (4) (2021)
Koh Onimaru, Kaori Tatsumi, Chiharu Tanegashima, Mitsutaka Kadota, Osamu Nishimura, Shigehiro Kuraku
Developmental hourglass and heterochronic shifts in fin and limb development. eLife 10 (2021)
Eriko Kajikawa, Uzuki Horo, Takahiro Ide, Katsutoshi Mizuno, Katsura Minegishi, Yuichiro Hara, Yayoi Ikawa, Hiromi Nishimura, Masanori Uchikawa, Hiroshi Kiyonari, Shigehiro Kuraku, Hiroshi Hamada
Nodal paralogues underlie distinct mechanisms for visceral left-right asymmetry in reptiles and mammals. Nature ecology & evolution 4 (2) (2020)
Kazuaki Yamaguchi, Mitsumasa Koyanagi, Shigehiro Kuraku
Visual and nonvisual opsin genes of sharks and other nonosteichthyan vertebrates: Genomic exploration of underwater photoreception. Journal of evolutionary biology 34 (6) (2020)
Yuichiro Hara, Kazuaki Yamaguchi, Koh Onimaru, Mitsutaka Kadota, Mitsumasa Koyanagi, Sean D Keeley, Kaori Tatsumi, Kaori Tanaka, Fumio Motone, Yuka Kageyama, Ryo Nozu, Noritaka Adachi, Osamu Nishimura, Reiko Nakagawa, Chiharu Tanegashima, Itsuki Kiyatake, Rui Matsumoto, Kiyomi Murakumo, Kiyonori Nishida, Akihisa Terakita, Shigeru Kuratani, Keiichi Sato, Susumu Hyodo, Shigehiro Kuraku
Shark genomes provide insights into elasmobranch evolution and the origin of vertebrates. Nature ecology & evolution 2 (11) (2018)
Ryo Nabeshima, Osamu Nishimura, Takako Maeda, Natsumi Shimizu, Takahiro Ide, Kenta Yashiro, Yasuo Sakai, Chikara Meno, Mitsutaka Kadota, Hidetaka Shiratori, Shigehiro Kuraku, Hiroshi Hamada
Loss of Fam60a, a Sin3a subunit, results in embryonic lethality and is associated with aberrant methylation at a subset of gene promoters. eLife 7 (2018)
Yuichiro Hara, Miki Takeuchi, Yuka Kageyama, Kaori Tatsumi, Masahiko Hibi, Hiroshi Kiyonari, Shigehiro Kuraku
Madagascar ground gecko genome analysis characterizes asymmetric fates of duplicated genes. BMC biology 16 (1) (2018)

Shigehiro Kuraku.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Shigehiro Kuraku